RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SEC61A1P61619 476 aaKnown RBP7.57□□□□□ -1.2
TPM3-201ENST00000271850 ACTG1P63261 375 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 MRPS34P82930 218 aaKnown RBP7.57□□□□□ -1.2
TPM3-201ENST00000271850 PSG4Q00888 419 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 CYP51A1Q16850 503 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 TBC1D28Q2M2D7 210 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 AWAT1Q58HT5 328 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 RABL3Q5HYI8 236 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
TPM3-201ENST00000271850 THEM4Q5T1C6 240 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 AGBL2Q5U5Z8 902 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 REP15Q6BDI9 236 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 ACSM5Q6NUN0 579 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 TMEM53Q6P2H8 277 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 SLC25A47Q6Q0C1 308 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 CCDC80Q76M96 950 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 NANOGNBQ7Z5D8 188 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 SNX32Q86XE0 403 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 ICA1LQ8NDH6 482 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 RBM15BQ8NDT2 890 aaKnown RBP7.57□□□□□ -1.2
TPM3-201ENST00000271850 DEFB108BQ8NET1 73 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 OR1J1Q8NGS3 322 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 SLC25A40Q8TBP6 338 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 LIPHQ8WWY8 451 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 GEMIN6Q8WXD5 167 aaKnown RBP7.57□□□□□ -1.2
TPM3-201ENST00000271850 C22orf15Q8WYQ4 148 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 MPP4Q96JB8 637 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 OR2J1Q9GZK6 312 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 NANOGQ9H9S0 305 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 SAP30LQ9HAJ7 183 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 CDH20Q9HBT6 801 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 NPHS2Q9NP85 383 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 MMP26Q9NRE1 261 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 KLHL21Q9UJP4 597 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 SLC13A4Q9UKG4 626 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 CORO2BQ9UQ03 480 aa7.57□□□□□ -1.2
TPM3-201ENST00000271850 SLC22A23A1A5C7 686 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 CENPBD1B2RD01 187 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 SPRY3O43610 288 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 ICMTO60725 284 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 OR6A2O95222 327 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 FARS2O95363 451 aaKnown RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 IGHV2-70P01814 119 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 UMPSP11172 480 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 ZNF26P17031 533 aaPredicted RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 STOMP27105 288 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 ERFP50548 548 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 ZNF81P51508 661 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 CLRN1P58418 232 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 UBA52P62987 128 aaKnown RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 ERVK-25P63136 954 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 PIN1Q13526 163 aaPredicted RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 ENDOGQ14249 297 aaKnown RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 VMACQ2NL98 169 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 PCGF3Q3KNV8 242 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 SLC36A2Q495M3 483 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 MBNL2Q5VZF2 373 aaKnown RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 TMEM154Q6P9G4 183 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 SHQ1Q6PI26 577 aaKnown RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 Q6ZR03 302 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 FOXL2NBQ6ZUU3 175 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 KLF14Q8TD94 323 aaPredicted RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 LRRC8CQ8TDW0 803 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 ZNF418Q8TF45 676 aaPredicted RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 STON2Q8WXE9 905 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 C11orf40Q8WZ69 217 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 NSMAFQ92636 917 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 LRRC58Q96CX6 371 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 ZNF48Q96MX3 618 aaPredicted RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 SIGLEC11Q96RL6 698 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 BCL2L14Q9BZR8 327 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 RNF121Q9H920 327 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 SIAEQ9HAT2 523 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 INIPQ9NRY2 104 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 SLCO1C1Q9NYB5 712 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 NDUFAF1Q9Y375 327 aa7.56□□□□□ -1.2
TPM3-201ENST00000271850 SOX21Q9Y651 276 aaPredicted RBP7.56□□□□□ -1.2
TPM3-201ENST00000271850 A0A0G2JMP0 313 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 A0A0X1KG70 313 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 C5orf49A4QMS7 147 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 CLDN25C9JDP6 229 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 TRAPPC2LH3BP13 241 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 IGF2P01344 180 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 CD55P08174 381 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 ADH4P08319 380 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 CCNOP22674 350 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 LAP3P28838 519 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 RAD52P43351 418 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 OR1E2P47887 323 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 LCN2P80188 198 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 NFYCQ13952 458 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 FAM209AQ5JX71 171 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 OTPQ5XKR4 325 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 NANOGP8Q6NSW7 305 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 ZNF774Q6NX45 483 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 DPPA2Q7Z7J5 298 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 PATL1Q86TB9 770 aaKnown RBP7.55□□□□□ -1.2
TPM3-201ENST00000271850 IGFN1Q86VF2 1251 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 BCL6BQ8N143 479 aaPredicted RBP7.55□□□□□ -1.2
TPM3-201ENST00000271850 OR4M2Q8NGB6 313 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms