RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SELENOPP49908 381 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 ROM1Q03395 351 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 TRAM1Q15629 374 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 MEP1BQ16820 701 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 RPS4Y2Q8TD47 263 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 ABHD3Q8WU67 409 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 THEM6Q8WUY1 208 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 C11orf40Q8WZ69 217 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 TMEM203Q969S6 136 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
SS18-201ENST00000269137 TM9SF2Q99805 663 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 RNF122Q9H9V4 155 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 SIAEQ9HAT2 523 aa12.51□□□□□ -0.41
SS18-201ENST00000269137 EXOSC4Q9NPD3 245 aaKnown RBP12.51□□□□□ -0.41
SS18-201ENST00000269137 A0A1B0GVG6 124 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 TMCC2O75069 709 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 SLC43A1O75387 559 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 PDGFAP04085 211 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 NTF4P34130 210 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 TGFBR1P36897 503 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 DCTN2Q13561 401 aaKnown RBP12.5□□□□□ -0.41
SS18-201ENST00000269137 CDK5R1Q15078 307 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 RPUSD3Q6P087 351 aaKnown RBP12.5□□□□□ -0.41
SS18-201ENST00000269137 KCTD18Q6PI47 426 aaPredicted RBP12.5□□□□□ -0.41
SS18-201ENST00000269137 ARL9Q6T311 187 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 FOXL2NBQ6ZUU3 175 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 CHMP1BQ7LBR1 199 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 SIAH3Q8IW03 269 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
SS18-201ENST00000269137 RNF166Q96A37 237 aaPredicted RBP12.5□□□□□ -0.41
SS18-201ENST00000269137 OR8B4Q96RC9 309 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 AMELYQ99218 206 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 RNF167Q9H6Y7 350 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 TXNL4BQ9NX01 149 aaKnown RBP12.5□□□□□ -0.41
SS18-201ENST00000269137 UGT2A1Q9Y4X1 527 aa12.5□□□□□ -0.41
SS18-201ENST00000269137 PHF3Q92576 2039 aaKnown RBP12.5□□□□□ -0.41
SS18-201ENST00000269137 AQP7O14520 342 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 LRRTM2O43300 516 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 UPK3AO75631 287 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 ADRB1P08588 477 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 OR8G3PP0DMU2 310 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
SS18-201ENST00000269137 UCNP55089 124 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 FABP5Q01469 135 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 LIPNQ5VXI9 398 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 OTPQ5XKR4 325 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 RPTNQ6XPR3 784 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 AAED1Q7RTV5 226 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.49□□□□□ -0.41
SS18-201ENST00000269137 ZNF679Q8IYX0 411 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 MS4A15Q8N5U1 240 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 OR10H5Q8NGA6 315 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 SMIM19Q96E16 107 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 PGLYRP3Q96LB9 341 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 DACH2Q96NX9 599 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 ABHD6Q9BV23 337 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 TMED9Q9BVK6 235 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 BCO1Q9HAY6 547 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 EMC3Q9P0I2 261 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 CYB5R1Q9UHQ9 305 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 IKZF2Q9UKS7 526 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 GRIP1Q9Y3R0 1128 aa12.49□□□□□ -0.41
SS18-201ENST00000269137 MAP1BP46821 2468 aaKnown RBP12.48□□□□□ -0.41
SS18-201ENST00000269137 A0A1W2PPL8 197 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 ZNF724A8MTY0 619 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 PSMD9O00233 223 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 DHHO43323 396 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 EIF2B1Q14232 305 aaKnown RBP12.48□□□□□ -0.41
SS18-201ENST00000269137 RNPS1Q15287 305 aaKnown RBP12.48□□□□□ -0.41
SS18-201ENST00000269137 INAQ16352 499 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 TBR1Q16650 682 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 PHYHD1Q5SRE7 291 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 RIPPLY2Q5TAB7 128 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 DEGS2Q6QHC5 323 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 LRRC69Q6ZNQ3 347 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 YIPF7Q8N8F6 280 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 OR52N5Q8NH56 324 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 FNDC9Q8TBE3 224 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 ST7LQ8TDW4 575 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 ZNF775Q96BV0 537 aaPredicted RBP12.48□□□□□ -0.41
SS18-201ENST00000269137 TAAR6Q96RI8 345 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 MROQ9BYG7 248 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 PRDM14Q9GZV8 571 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 SEC61A2Q9H9S3 476 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 POLE4Q9NR33 117 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 SLCO1C1Q9NYB5 712 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 GSTK1Q9Y2Q3 226 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 GPRIN2O60269 458 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 ID4P47928 161 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 SERPINB10P48595 397 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 TMPRSS3P57727 454 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 SLC3A1Q07837 685 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 C3AR1Q16581 482 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 DGUOKQ16854 277 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 FDX2Q6P4F2 183 aa12.48□□□□□ -0.41
SS18-201ENST00000269137 TBC1D15Q8TC07 691 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms