RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ASB16Q96NS5 453 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 OR52D1Q9H346 318 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 MYNNQ9NPC7 610 aa7.96□□□□□ -1.14
VAPB-201ENST00000265619 MED19A0JLT2 244 aaPredicted RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 FOXE1O00358 373 aaPredicted RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 PHOX2AO14813 284 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 PPM1DO15297 605 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ZIC2O95409 532 aaPredicted RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 IL18BPO95998 194 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 C8GP07360 202 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 FABP4P15090 132 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 NDUFV2P19404 249 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 TEAD1P28347 426 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 CD34P28906 385 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 CD200P41217 278 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 MNDAP41218 407 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 PRKXP51817 358 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 PCBP4P57723 403 aaKnown RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 VWA2Q5GFL6 755 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 TMEM31Q5JXX7 168 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 IL34Q6ZMJ4 242 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 MBOAT2Q6ZWT7 520 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 FIBINQ8TAL6 211 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 PIGXQ8TBF5 258 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 SLC25A36Q96CQ1 311 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 NTNG2Q96CW9 530 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 RNF126Q9BV68 326 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 TUBA4BQ9H853 241 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 DEC1Q9P2X7 70 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 IL36AQ9UHA7 158 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ZNF346Q9UL40 294 aaKnown RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 COL4A3Q01955 1670 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 DOCK9Q9BZ29 2069 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 FAM86C2PA6NEL3 165 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 BHLHE40O14503 412 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ZNF208O43345 1280 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 F10P00742 488 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 SOX2P48431 317 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 DIO1P49895 249 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 HSD11B2P80365 405 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 DLX2Q07687 328 aaPredicted RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 CRMP1Q14194 572 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 AMZ1Q400G9 498 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 SCGB2B2Q4G0G5 96 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 COL13A1Q5TAT6 717 aaPredicted RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 TMEM205Q6UW68 189 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ZNF664Q8N3J9 261 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 FRMD1Q8N878 549 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 VN1R2Q8NFZ6 395 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 OR6X1Q8NH79 312 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 SLC39A7Q92504 469 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 DCUN1D4Q92564 292 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 CXorf40BQ96DE9 158 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 YPEL4Q96NS1 127 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 G6PC3Q9BUM1 346 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ZMAT3Q9HA38 289 aaKnown RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 TRPV4Q9HBA0 871 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 GNG8Q9UK08 70 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 NUP210LQ5VU65 1888 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 HEATR5AQ86XA9 2040 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ALPK2Q86TB3 2170 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 MDC1Q14676 2089 aaKnown RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 OR52A4PA6NMU1 304 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 A8MWP6 167 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 NPC1O15118 1278 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 OGG1O15527 345 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 HLA-AP01891 365 aaKnown RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 RPN2P04844 631 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 EDNRAP25101 427 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 CLEC2AQ6UVW9 174 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ENPP7Q6UWV6 458 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 NPSR1Q6W5P4 371 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 GDF7Q7Z4P5 450 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 ZNF761Q86XN6 746 aaPredicted RBP7.95□□□□□ -1.14
VAPB-201ENST00000265619 C10orf53Q8N6V4 93 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 OR10AD1Q8NGE0 317 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 MR1Q95460 341 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 DNAJA3Q96EY1 480 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 SNHG12Q9BXW3 62 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 SPACA1Q9HBV2 294 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 COMMD9Q9P000 198 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 FBXL21Q9UKT6 434 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 VSIG4Q9Y279 399 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 HS3ST3B1Q9Y662 390 aa7.95□□□□□ -1.14
VAPB-201ENST00000265619 TICRRQ7Z2Z1 1910 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 A0A087WV62 115 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 CENPVL1A0A0U1RR11 272 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 GLOD5A6NK44 160 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BKO60814 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BJP06899 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 CXCL1P09341 107 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 FBXO45P0C2W1 286 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BOP23527 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HOXC12P31275 282 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BBP33778 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BDP58876 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 HIST1H2BCP62807 126 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 ST3GAL3Q11203 375 aa7.94□□□□□ -1.14
VAPB-201ENST00000265619 TRA2AQ13595 282 aaKnown RBP eCLIP7.94□□□□□ -1.143e-6■□□□□ 11.2
VAPB-201ENST00000265619 HIST2H2BEQ16778 126 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms