RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CLPTM1O96005 669 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LCKP06239 509 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 CST2P09228 141 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 TACSTD2P09758 323 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LYNX1P0DP58 116 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 HSD17B1P14061 328 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 STOMP27105 288 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LAP3P28838 519 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 FOXL2NBQ6ZUU3 175 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 SYNPRQ8TBG9 265 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 MSI2Q96DH6 328 aaKnown RBP13.78□□□□□ -0.2
USE1-201ENST00000263897 PYURFQ96I23 114 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 FAM46AQ96IP4 442 aaKnown RBP13.78□□□□□ -0.2
USE1-201ENST00000263897 POM121L2Q96KW2 1035 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 Q96M85 177 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 CDRT15Q96T59 188 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 OR51B6Q9H340 312 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 ARL8BQ9NVJ2 186 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 TAAR3PQ9P1P4 343 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 TAGLN3Q9UI15 199 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 GPR160Q9UJ42 338 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 SIGLEC7Q9Y286 467 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 ADAM18Q9Y3Q7 739 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 TIMM10BQ9Y5J6 103 aa13.78□□□□□ -0.2
USE1-201ENST00000263897 LOC100509620A0A075B734 347 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 LOC100289279A0A1B0GTE1 492 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 A0A1W2PPW3 197 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 DIRAS1O95057 198 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 NDUFB2O95178 105 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 HPXP02790 462 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 NAT2P11245 290 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 ZNF16P17020 682 aaPredicted RBP13.77□□□□□ -0.21
USE1-201ENST00000263897 CCNOP22674 350 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 COL8A2P25067 703 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 MSX2P35548 267 aaPredicted RBP13.77□□□□□ -0.21
USE1-201ENST00000263897 OMPP47874 163 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 LIMS1P48059 325 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 KLF3P57682 345 aaPredicted RBP13.77□□□□□ -0.21
USE1-201ENST00000263897 PCBD1P61457 104 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 ERVS71-1P61550 626 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 KRT72Q14CN4 511 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 SEC23BQ15437 767 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 FGD3Q5JSP0 725 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 ELFN2Q5R3F8 820 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 FAM122BQ7Z309 247 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 ALDH16A1Q8IZ83 802 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 PGAM4Q8N0Y7 254 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 AKR7LQ8NHP1 331 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 DHRS1Q96LJ7 313 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 MDFIQ99750 246 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 OR2H1Q9GZK4 316 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 NDEL1Q9GZM8 345 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 WNT5BQ9H1J7 359 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 CDC42EP3Q9UKI2 254 aa13.77□□□□□ -0.21
USE1-201ENST00000263897 TRBV4-1A0A0J9YWV2 114 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 A0A1W2PPL8 197 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 LRP5LA4QPB2 252 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 H7C1C5 153 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 XKRYO14609 159 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 DCTN3O75935 186 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 SCG5P05408 212 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 ITGA2P17301 1181 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 MSR1P21757 451 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 GDI2P50395 445 aaKnown RBP13.76□□□□□ -0.21
USE1-201ENST00000263897 CHN2P52757 468 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 LCN6P62502 163 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 ENDOGQ14249 297 aaKnown RBP13.76□□□□□ -0.21
USE1-201ENST00000263897 NKPD1Q17RQ9 610 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 SAMD4BQ5PRF9 694 aaKnown RBP13.76□□□□□ -0.21
USE1-201ENST00000263897 FAM166AQ6J272 317 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 SYT9Q86SS6 491 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 OR1J1Q8NGS3 322 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 OR52J3Q8NH60 311 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 RDH5Q92781 318 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 FUZQ9BT04 418 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 ZNF416Q9BWM5 594 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 BEX2Q9BXY8 128 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 NRIP3Q9NQ35 241 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 HINT3Q9NQE9 182 aaKnown RBP13.76□□□□□ -0.21
USE1-201ENST00000263897 SLCO1C1Q9NYB5 712 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 EIF3KQ9UBQ5 218 aaKnown RBP13.76□□□□□ -0.21
USE1-201ENST00000263897 MAGEL2Q9UJ55 1249 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 AURKCQ9UQB9 309 aa13.76□□□□□ -0.21
USE1-201ENST00000263897 PRSS37A4D1T9 235 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 C5orf49A4QMS7 147 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 C12orf71A8MTZ7 269 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 C17orf100A8MU93 164 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 TGFAP01135 160 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 IFNA2P01563 188 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 IGHV3-13P01766 116 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 SEMG1P04279 462 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 WNT5AP41221 380 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 SMIM11AP58511 58 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 MRPS11P82912 194 aaKnown RBP13.75□□□□□ -0.21
USE1-201ENST00000263897 MOGQ16653 247 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 ALKBH6Q3KRA9 238 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 MESTQ5EB52 335 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 GPR139Q6DWJ6 353 aa13.75□□□□□ -0.21
USE1-201ENST00000263897 ZNF101Q8IZC7 436 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms