RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ANKRD61A6NGH8 418 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 LRRC30A6NM36 301 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 SIRPB1O00241 398 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 SYT5O00445 386 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 UBL3O95164 117 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 HSF1Q00613 529 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 GRINAQ7Z429 371 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 OR51S1Q8NGJ8 323 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 OR13F1Q8NGS4 319 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 TSLPQ969D9 159 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF75AQ96N20 296 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 MKRN2Q9H000 416 aaKnown RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 HEYLQ9NQ87 328 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 OBP2AQ9NY56 170 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ETV7Q9Y603 341 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 AKAP11Q9UKA4 1901 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 OR6C76A6NM76 312 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 TNFSF11O14788 317 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 MAGEB4O15481 346 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 LINC01565O15544 149 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 FGF17O60258 216 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 QDPRP09417 244 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 PIPP12273 146 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 HNF1AP20823 631 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 PPP2CBP62714 309 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 PPP2CAP67775 309 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 C2orf76Q3KRA6 126 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ANKRD16Q6P6B7 361 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 TRILQ7L0X0 811 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.08□□□□□ -0.64
COL8A1-201ENST00000261037 S100A7AQ86SG5 101 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 MZB1Q8WU39 189 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 UCN3Q969E3 161 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 C20orf24Q9BUV8 137 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 CHST2Q9Y4C5 530 aa11.08□□□□□ -0.64
COL8A1-201ENST00000261037 STRCQ7RTU9 1775 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OLFM2O95897 454 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 TGM6O95932 706 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 SLC35D3Q5M8T2 416 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 CATSPERDQ86XM0 798 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 FAM109AQ8N4B1 249 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 SLC30A7Q8NEW0 376 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 TMEM174Q8WUU8 243 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 MBOAT4Q96T53 435 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 CSF3RQ99062 836 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR11A1Q9GZK7 315 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 PATZ1Q9HBE1 687 aaKnown RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 TAS2R5Q9NYW4 299 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 CORINQ9Y5Q5 1042 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 GOLGA4Q13439 2230 aaKnown RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 STRCP1A6NGW2 1772 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR2A25A4D2G3 310 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 LGI1O95970 557 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR13C7P0DN81 318 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 TLE1Q04724 770 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 DUSP2Q05923 314 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF784Q8NCA9 323 aaPredicted RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR51A4Q8NGJ6 313 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR51A2Q8NGJ7 313 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR5H6Q8NGV6 325 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 EXOSC3Q9NQT5 275 aaKnown RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF346Q9UL40 294 aaKnown RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 ELK1P19419 428 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 EMDP50402 254 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 LPCAT3Q6P1A2 487 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 PAQR6Q6TCH4 344 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 RBMS3Q6XE24 437 aaKnown RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR10J5Q8NHC4 309 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 GAB3Q8WWW8 586 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 PSD2Q9BQI7 771 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 MUTYHQ9UIF7 546 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 ASB1Q9Y576 335 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 ATP23Q9Y6H3 246 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 hCG_1809904A0A1W2PP81 198 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 A0A1W2PPE2 198 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 A0A1W2PR64 198 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 A0A1W2PRV1 198 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 HIST1H1CP16403 213 aaKnown RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 IL3RAP26951 378 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 GABRA4P48169 554 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 ADIRFQ15847 76 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 NKAIN1Q4KMZ8 207 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 CLDN22Q8N7P3 220 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 OR1N1Q8NGS0 311 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 BOD1Q96IK1 185 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 PKMYT1Q99640 499 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 TXN2Q99757 166 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 CHST11Q9NPF2 352 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 MRPL22Q9NWU5 206 aaKnown RBP11.07□□□□□ -0.64
COL8A1-201ENST00000261037 DAPP1Q9UN19 280 aa11.07□□□□□ -0.64
COL8A1-201ENST00000261037 CSF3P09919 207 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 PCSK6P29122 969 aa11.06□□□□□ -0.64
COL8A1-201ENST00000261037 RPS19P39019 145 aaKnown RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 ZNF133P52736 654 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-201ENST00000261037 P2RX3P56373 397 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms