RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SPEM1Q8N4L4 309 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 FAM160A2Q8N612 972 aaPredicted RBP9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF614Q8N883 585 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 SDR9C7Q8NEX9 313 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 OR51S1Q8NGJ8 323 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 OR5M8Q8NGP6 311 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 TGM7Q96PF1 710 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 OR10A5Q9H207 317 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ZNF768Q9H5H4 540 aaKnown RBP9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 SLC17A5Q9NRA2 495 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 ZFP57Q9NU63 452 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 COMMD9Q9P000 198 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 STEAP1Q9UHE8 339 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 MOKQ9UQ07 419 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 OR10H1Q9Y4A9 318 aa9.77□□□□□ -0.84
CHRNA1-201ENST00000261007 LAMA2P24043 3122 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 SULT1C2O00338 296 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 NDUFB2O95178 105 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 OR4E1P0C645 316 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 HIST1H1CP16403 213 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 HLA-GP17693 338 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 ADRA2CP18825 462 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 ADH7P40394 386 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 ACAA2P42765 397 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 LUMP51884 338 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 NANOS3P60323 173 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 ISXQ2M1V0 245 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 YOD1Q5VVQ6 348 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 RCBTB1Q8NDN9 531 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 STEAP2Q8NFT2 490 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 OR1J4Q8NGS1 313 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 DOK4Q8TEW6 326 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 DUSP19Q8WTR2 217 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 VRK1Q99986 396 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 WDR13Q9H1Z4 485 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 PCDHB10Q9UN67 800 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 SLCO1B1Q9Y6L6 691 aa9.77□□□□□ -0.85
CHRNA1-201ENST00000261007 SERINC4A6NH21 518 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CCDC85CA6NKD9 419 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 TMEM200CA6NKL6 621 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC25A12O75746 678 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CSTAP01040 98 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 S100A8P05109 93 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 SMIM6P0DI80 62 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CD1CP29017 333 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 BDKRB2P30411 391 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 PRSS3P35030 304 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ARL4DP49703 201 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ACTBP60709 375 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ACTG1P63261 375 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 GUCA2BQ16661 112 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 SWI5Q1ZZU3 235 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 FAM122BQ7Z309 247 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ZAR1Q86SH2 424 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 KMT5CQ86Y97 462 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 PLXDC1Q8IUK5 500 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ZNF615Q8N8J6 731 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 TMEM229BQ8NBD8 167 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CLEC1AQ8NC01 280 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 OR1S2Q8NGQ3 325 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 OR4K13Q8NH42 304 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 C16orf52Q8NHV5 167 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ZNF417Q8TAU3 575 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 STK35Q8TDR2 534 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 RNF166Q96A37 237 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 HSPA12BQ96MM6 686 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 SLC46A1Q96NT5 459 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ZNF471Q9BX82 626 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 POTEKPQ9BYX7 375 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 NMNAT2Q9BZQ4 307 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CHST6Q9GZX3 395 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 POFUT1Q9H488 388 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CCDC86Q9H6F5 360 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CAPN10Q9HC96 672 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 FLRT3Q9NZU0 649 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 ZNF107Q9UII5 783 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 CLDN16Q9Y5I7 305 aa9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 TDRD6O60522 2096 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-201ENST00000261007 TRBV5-7A0A0A0MS05 114 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 TMEM82A0PJX8 343 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 RNF222A6NCQ9 220 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 TGFBR3LH3BV60 316 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 LINC01387J3KSC0 135 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 NUDT21O43809 227 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 DUX1O43812 170 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 CTAG2O75638 210 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 PIAS2O75928 621 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 IGKV1D-16P01601 117 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 ANXA2P07355 339 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 TMIGD3P0DMS9 266 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 CT45A8P0DMV1 189 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 CT45A9P0DMV2 189 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 FOLR2P14207 255 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 TAS2R19P59542 299 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 DCAF7P61962 342 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 HSD11B2P80365 405 aa9.75□□□□□ -0.85
CHRNA1-201ENST00000261007 PLAURQ03405 335 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms