RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 DCUN1D4Q92564 292 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FGF11Q92914 225 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FGGYQ96C11 551 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 VSTM2LQ96N03 204 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF587Q96SQ5 575 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 VRK1Q99986 396 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 APMAPQ9HDC9 416 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 GPN3Q9UHW5 284 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 CD207Q9UJ71 328 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 WDR87Q6ZQQ6 2873 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TMED7-TICAM2A0A0A6YYA0 188 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ANKRD20A5PA0PJZ0 165 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 KRBOX1C9JBD0 128 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 H7C417 338 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TOR1AO14656 332 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TNFRSF10CO14798 259 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PHYHO14832 338 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 MPZL1O95297 269 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 KNG1P01042 644 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CT45A8P0DMV1 189 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CT45A9P0DMV2 189 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PI3P19957 117 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FBLP22087 321 aaKnown RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 DPP4P27487 766 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SFTPDP35247 375 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 MNX1P50219 401 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 CAPZA1P52907 286 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FOXL2P58012 376 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 YPEL5P62699 121 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 PLA2G7Q13093 441 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SLC9A3R2Q15599 337 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TOMM34Q15785 309 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 SLC22A6Q4U2R8 563 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CT45A2Q5DJT8 189 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TMEM225Q6GV28 225 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FBXO46Q6PJ61 603 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 TMEM92Q6UXU6 159 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 C16orf47Q6ZP98 133 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 DCXRQ7Z4W1 244 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TRAPPC6BQ86SZ2 158 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SLC51BQ86UW2 128 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SPAG16Q8N0X2 631 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 EID2Q8N6I1 236 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF283Q8N7M2 679 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TEX19Q8NA77 164 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 FAM71CQ8NEG0 241 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 OR1J2Q8NGS2 313 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 THRSPQ92748 146 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TAAR8Q969N4 342 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CMBLQ96DG6 245 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 LCORQ96JN0 433 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 SLX1AQ9BQ83 275 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 CUTCQ9NTM9 273 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 ZNF701Q9NV72 531 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 OBP2AQ9NY56 170 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 EMC3Q9P0I2 261 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 MTFP1Q9UDX5 166 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 SERTAD3Q9UJW9 196 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 TMED7Q9Y3B3 224 aa4.3□□□□□ -1.72
USP44-201ENST00000258499 RP1L1Q8IWN7 2480 aaPredicted RBP4.3□□□□□ -1.72
USP44-201ENST00000258499 AHCTF1Q8WYP5 2266 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 COL4A6Q14031 1691 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 SDK2Q58EX2 2172 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PLXNA4Q9HCM2 1894 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 THSD7BQ9C0I4 1608 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 A0A0B4J2A0 478 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 A0A1B0GV50 99 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR5H14A6NHG9 310 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CTAG2O75638 210 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 IGF2P01344 180 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 LPLP06858 475 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR4E1P0C645 316 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ADRA2CP18825 462 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CEBPGP53567 150 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 FGL1Q08830 312 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CCINQ13939 588 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 NKAPLQ5M9Q1 402 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 MANEAQ5SRI9 462 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 DCAF12L2Q5VW00 463 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ZNF626Q68DY1 528 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 OR52W1Q6IF63 320 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ABHD12BQ7Z5M8 362 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 GKN2Q86XP6 184 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CMIPQ8IY22 773 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 LSMEM1Q8N8F7 131 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PXT1Q8NFP0 134 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ST8SIA2Q92186 375 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 HGDQ93099 445 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 ZDHHC12Q96GR4 267 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 C4orf45Q96LM5 186 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 TSPAN32Q96QS1 320 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 AMELYQ99218 206 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PHB2Q99623 299 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 PELOQ9BRX2 385 aaKnown RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 ST6GALNAC5Q9BVH7 336 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.29□□□□□ -1.72
USP44-201ENST00000258499 METTL7AQ9H8H3 244 aa4.29□□□□□ -1.72
USP44-201ENST00000258499 CHMP1AQ9HD42 196 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms