RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TCTN3Q6NUS6 607 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 MAFAQ8NHW3 353 aaPredicted RBP17.32■□□□□ 0.36
PTPRE-201ENST00000254667 S1PR5Q9H228 398 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 IGLV3-16A0A075B6K0 115 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 KIR2DS1A0A191URI9 304 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 KIR2DS4P43632 304 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 EGR3Q06889 387 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 KIR2DS1Q14954 304 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 OR5M1Q8NGP8 315 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 SLAMF6Q96DU3 332 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 WNT16Q9UBV4 365 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 HRH3Q9Y5N1 445 aa17.32■□□□□ 0.36
PTPRE-201ENST00000254667 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 SHISA7A6NL88 538 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 PMS2P2O95744 297 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 IDH3GP51553 393 aaPredicted RBP17.31■□□□□ 0.36
PTPRE-201ENST00000254667 ZNF687Q8N1G0 1237 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 CPEB3Q8NE35 698 aaKnown RBP17.31■□□□□ 0.36
PTPRE-201ENST00000254667 SLC25A46Q96AG3 418 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 SCPEP1Q9HB40 452 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 ACOXLQ9NUZ1 547 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 MYO10Q9HD67 2058 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 SIPA1L3O60292 1781 aaPredicted RBP17.31■□□□□ 0.36
PTPRE-201ENST00000254667 SSX3Q99909 188 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 EMC6Q9BV81 110 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 SLC38A1Q9H2H9 487 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 AGPAT2O15120 278 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 STK17BO94768 372 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 NME1P15531 152 aaKnown RBP17.31■□□□□ 0.36
PTPRE-201ENST00000254667 RPL18Q07020 188 aaKnown RBP17.31■□□□□ 0.36
PTPRE-201ENST00000254667 LTC4SQ16873 150 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 ACSM5Q6NUN0 579 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 OR4A16Q8NH70 328 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 LOC107986453A0A1B0GWG9 222 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 CLEC2LP0C7M8 214 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 RBP2P50120 134 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 PTOV1Q86YD1 416 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 TP53I13Q8NBR0 393 aaPredicted RBP17.31■□□□□ 0.36
PTPRE-201ENST00000254667 PAQR8Q8TEZ7 354 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 C8orf44Q96CB5 159 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 TNFRSF12AQ9NP84 129 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 PCDHGA5Q9Y5G8 931 aa17.31■□□□□ 0.36
PTPRE-201ENST00000254667 SCN9AQ15858 1988 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 HSPB6O14558 160 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 LAP3P28838 519 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 ETV1P50549 477 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 RNLSQ5VYX0 342 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 UBE2FQ969M7 185 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 CNRIP1Q96F85 164 aaPredicted RBP17.3■□□□□ 0.36
PTPRE-201ENST00000254667 AP1S3Q96PC3 154 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 PDCD1LG2Q9BQ51 273 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 HIPK2Q9H2X6 1198 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 TXNIPQ9H3M7 391 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 PPP1R14DQ9NXH3 145 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 TRABD2BA6NFA1 517 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 SERPINA7P05543 415 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 CHRNB1P11230 501 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 CPEP16870 476 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 KIR2DL3P43628 341 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 MDGA2Q7Z553 956 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 RIMKLAQ8IXN7 391 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 EMG1Q92979 244 aaKnown RBP17.3■□□□□ 0.36
PTPRE-201ENST00000254667 CPNE4Q96A23 557 aaPredicted RBP17.3■□□□□ 0.36
PTPRE-201ENST00000254667 HRASLSQ9HDD0 168 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 ZNF732B4DXR9 585 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 TRA2AQ13595 282 aaKnown RBP eCLIP17.3■□□□□ 0.36
PTPRE-201ENST00000254667 BRICD5Q6PL45 260 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 INTS12Q96CB8 462 aaKnown RBP17.3■□□□□ 0.36
PTPRE-201ENST00000254667 IER2Q9BTL4 223 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 SULT1C4O75897 302 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 IL2RAP01589 272 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 POU2F2P09086 479 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 CASP3P42574 277 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 DMWDQ09019 674 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 TMEM99Q8N816 258 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 RBMXL1Q96E39 390 aaKnown RBP17.3■□□□□ 0.36
PTPRE-201ENST00000254667 RNF170Q96K19 258 aa17.3■□□□□ 0.36
PTPRE-201ENST00000254667 FAM212BQ9NTI7 297 aaPredicted RBP17.3■□□□□ 0.36
PTPRE-201ENST00000254667 HOXC4P09017 264 aaPredicted RBP17.29■□□□□ 0.36
PTPRE-201ENST00000254667 PPIAP62937 165 aaKnown RBP17.29■□□□□ 0.36
PTPRE-201ENST00000254667 EDEM2Q9BV94 578 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 POLDIP2Q9Y2S7 368 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 HDGFL3Q9Y3E1 203 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 BCORQ6W2J9 1755 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 CTXN2P0C2S0 81 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 TBXA2RP21731 343 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 PAN3Q58A45 887 aaKnown RBP17.29■□□□□ 0.36
PTPRE-201ENST00000254667 OR1M1Q8NGA1 313 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 ARRDC1-AS1Q9H2J1 176 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 NDUFB11Q9NX14 153 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 ECM29Q5VYK3 1845 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 DEGS1O15121 323 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 TNFSF15O95150 251 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 CISD3P0C7P0 127 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 CTGFP29279 349 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 HOXA1P49639 335 aaPredicted RBP17.29■□□□□ 0.36
PTPRE-201ENST00000254667 RNF4P78317 190 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 TMEM81Q6P7N7 255 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 OR6C6A6NF89 314 aa17.29■□□□□ 0.36
PTPRE-201ENST00000254667 TUSC2O75896 110 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms