RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PNO1Q9NRX1 252 aaKnown RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 SLC22A13Q9Y226 551 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 SLC6A5Q9Y345 797 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 TMEM272A0A1B0GTI8 110 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 FITM1A5D6W6 292 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 C2CD4DB7Z1M9 353 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 EEF1E1-BLOC1S5C9J1V9 151 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 F5H0A9 414 aaPredicted RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 GLSO94925 669 aaPredicted RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 IL11P20809 199 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 ITGA3P26006 1051 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 NUDT1P36639 197 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 GRK6P43250 576 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 MECP2P51608 486 aaKnown RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 PSMD4P55036 377 aaKnown RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 INSM1Q01101 510 aaPredicted RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 CFHR1Q03591 330 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 MEP1BQ16820 701 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 COL13A1Q5TAT6 717 aaPredicted RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 ATRAIDQ6UW56 229 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 OR10K1Q8NGX5 313 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 S100A16Q96FQ6 103 aaKnown RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 LRRC46Q96FV0 321 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 DMRTA2Q96SC8 542 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 ZNF416Q9BWM5 594 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 OR8D2Q9GZM6 311 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 SLITRK2Q9H156 845 aa9.12□□□□□ -0.95
COPB1-201ENST00000249923 EXOSC3Q9NQT5 275 aaKnown RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 DHCR7Q9UBM7 475 aaKnown RBP9.12□□□□□ -0.95
COPB1-201ENST00000249923 TRAV18A0A075B6X5 111 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 PLSCR5A0PG75 271 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 OR2AT4A6NND4 320 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 TO15178 435 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 F12P00748 615 aaPredicted RBP9.11□□□□□ -0.95
COPB1-201ENST00000249923 CALCBP10092 127 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 PNMTP11086 282 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 CCR5P51681 352 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 FAM69AQ5T7M9 428 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 ARMC6Q6NXE6 501 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 OR51D1Q8NGF3 324 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 C4orf45Q96LM5 186 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 NUDT9Q9BW91 350 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 TPSD1Q9BZJ3 242 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 GRHPRQ9UBQ7 328 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 ABCA7Q8IZY2 2146 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 C11orf98E9PRG8 122 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 CLDN4O14493 209 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 CTAG2O75638 210 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 NDUFB6O95139 128 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 HPGDP15428 266 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 AKR1C3P42330 323 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 ZP2Q05996 745 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 SLC36A1Q7Z2H8 476 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 SMRP1Q8NCR6 262 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 DUSP15Q9H1R2 295 aaPredicted RBP9.11□□□□□ -0.95
COPB1-201ENST00000249923 LAMP5Q9UJQ1 280 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 MRPS33Q9Y291 106 aaKnown RBP9.11□□□□□ -0.95
COPB1-201ENST00000249923 MPZL1O95297 269 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 HLA-DOBP13765 273 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 PPICP45877 212 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 DHODHQ02127 395 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 DCAF12L2Q5VW00 463 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 ZNF626Q68DY1 528 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 FAM166AQ6J272 317 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 TMEM205Q6UW68 189 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 FAM180AQ6UWF9 173 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 CD163Q86VB7 1156 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 OR4C16Q8NGL9 310 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 OTOSQ8NHW6 89 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 STK35Q8TDR2 534 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 CYYR1Q96J86 154 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 ATXN7L1Q9ULK2 861 aaPredicted RBP9.11□□□□□ -0.95
COPB1-201ENST00000249923 MOKQ9UQ07 419 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 EXPH5Q8NEV8 1989 aa9.11□□□□□ -0.95
COPB1-201ENST00000249923 LOC101059948A0A1B0GTJ6 334 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 SHOXO15266 292 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ZNF354AO60765 605 aaPredicted RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 SDC3O75056 442 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ITGA10O75578 1167 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 S100A6P06703 90 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 CTLA4P16410 223 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ART1P52961 327 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 EBPQ15125 230 aaKnown RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 SMAD2Q15796 467 aaKnown RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 VWA2Q5GFL6 755 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 C16orf47Q6ZP98 133 aaPredicted RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 TTLL10Q6ZVT0 673 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ZNF519Q8TB69 540 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 MARC2Q969Z3 335 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 C8orf44Q96CB5 159 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 ZNF578Q96N58 590 aaPredicted RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 CHST6Q9GZX3 395 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 PARP12Q9H0J9 701 aaKnown RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 PHF3Q92576 2039 aaKnown RBP9.1□□□□□ -0.95
COPB1-201ENST00000249923 M0QYG6 137 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 SCDO00767 359 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 NPIPB7O75200 414 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 OR2A4O95047 310 aa9.1□□□□□ -0.95
COPB1-201ENST00000249923 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms