RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 CCL4L1Q8NHW4 92 aa12.14□□□□□ -0.47
CCDC117-201ENST00000249064 SPPL3Q8TCT6 385 aa12.14□□□□□ -0.47
CCDC117-201ENST00000249064 GPR148Q8TDV2 347 aa12.14□□□□□ -0.47
CCDC117-201ENST00000249064 SLC17A9Q9BYT1 436 aa12.14□□□□□ -0.47
CCDC117-201ENST00000249064 PBX4Q9BYU1 374 aa12.14□□□□□ -0.47
CCDC117-201ENST00000249064 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
CCDC117-201ENST00000249064 GRHPRQ9UBQ7 328 aa12.14□□□□□ -0.47
CCDC117-201ENST00000249064 KDM4EB2RXH2 506 aaPredicted RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 KLK3P07288 261 aaPredicted RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 CA3P07451 260 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 SLC2A5P22732 501 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 OMGP23515 440 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 RAG2P55895 527 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 SSTP61278 116 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 CTAG1AP78358 180 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 GLYATL3Q5SZD4 288 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 GABRG1Q8N1C3 465 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 OR6K3Q8NGY3 331 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 FAM213BQ8TBF2 198 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 HHIPQ96QV1 700 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 REG4Q9BYZ8 158 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 OR51M1Q9H341 326 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 MTHFD2LQ9H903 347 aaPredicted RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 PELI2Q9HAT8 420 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 RASL12Q9NYN1 266 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 AMDHD2Q9Y303 409 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 RNGTTO60942 597 aaKnown RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 CLDN6P56747 220 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 MAT1AQ00266 395 aaKnown RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 RUNX3Q13761 415 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 LIPNQ5VXI9 398 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 LRRC69Q6ZNQ3 347 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 LRRC25Q8N386 305 aaPredicted RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 DEFB119Q8N690 84 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 PPP1R14AQ96A00 147 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 RSPRY1Q96DX4 576 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 RBM18Q96H35 190 aaKnown RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 ZNF275Q9NSD4 429 aaPredicted RBP12.13□□□□□ -0.47
CCDC117-201ENST00000249064 OR5V1Q9UGF6 321 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 A0A1W2PPE2 198 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 HMSDA8MTL9 139 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 GNRH1P01148 92 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 SERPINA2P20848 420 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 CTXN1P60606 82 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 CDK5R1Q15078 307 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 SGCAQ16586 387 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 THSD4Q6ZMP0 1018 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 PXKQ7Z7A4 578 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 ASPGQ86U10 573 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 RFLNBQ8N5W9 214 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 MITD1Q8WV92 249 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 TMPRSS5Q9H3S3 457 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 TAF9BQ9HBM6 251 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 LANCL2Q9NS86 450 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
CCDC117-201ENST00000249064 COL4A4P53420 1690 aaPredicted RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 C17orf113A0A1B0GUU1 675 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ZNF10P21506 573 aaPredicted RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 PSMB6P28072 239 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 TAGLN2P37802 199 aaKnown RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 CASRP41180 1078 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ERV3-1Q14264 604 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 TRMT12Q53H54 448 aaKnown RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 METRNLQ641Q3 311 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ZNF705AQ6ZN79 300 aaPredicted RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 RNF165Q6ZSG1 346 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 TMEM104Q8NE00 496 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 FAM3DQ96BQ1 224 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 SMIM19Q96E16 107 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 SOHLH2Q9NX45 425 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 EPHA6Q9UF33 1036 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ARRDC5A6NEK1 342 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 CLEC3AO75596 197 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ERCC1P07992 297 aaPredicted RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 HIST1H1CP16403 213 aaKnown RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 HOXB9P17482 250 aaPredicted RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ZNF84P51523 738 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 DHRS2Q13268 280 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 PDE7AQ13946 482 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 USP53Q70EK8 1073 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 CAMKMTQ7Z624 323 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 NPRL2Q8WTW4 380 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ACTRT3Q9BYD9 372 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
CCDC117-201ENST00000249064 METTL12A8MUP2 240 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 PEX12O00623 359 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 MOSPD3O75425 235 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 NDUFB2O95178 105 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 RENP00797 406 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ST6GAL1P15907 406 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 GJA4P35212 333 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ID4P47928 161 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 RIPPLY1Q0D2K3 151 aa12.12□□□□□ -0.47
CCDC117-201ENST00000249064 ABHD17CQ6PCB6 329 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms