RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ZNF222Q9UK12 451 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 CAMK2AQ9UQM7 478 aa14.17□□□□□ -0.14
LRFN1-201ENST00000248668 TEX51A0A1B0GUA7 166 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 SLC22A23A1A5C7 686 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 CELA2AP08217 269 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 TRAPPC2P0DI81 140 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 TRAPPC2BP0DI82 140 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 ZNF519Q8TB69 540 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 HAVCR2Q8TDQ0 301 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 SEMA4CQ9C0C4 833 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 MYEF2Q9P2K5 600 aaKnown RBP14.16□□□□□ -0.14
LRFN1-201ENST00000248668 FBXL3Q9UKT7 428 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 CACNA1GO43497 2377 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 ADAMTS9Q9P2N4 1935 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 IGKV1D-43A0A0B4J1Z2 117 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 TMEM200CA6NKL6 621 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 GMDSO60547 372 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 MT-ATP6P00846 226 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 CDK2P24941 298 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 PITPNAQ00169 270 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 TMEM69Q5SWH9 247 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 PRAMEF20Q5VT98 475 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 MARC2Q969Z3 335 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 MS4A3Q96HJ5 214 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 ZCCHC4Q9H5U6 513 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 CDCP1Q9H5V8 836 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 MASP2O00187 686 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 PUDPQ08623 228 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 LPAL2Q16609 132 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 SAP25Q8TEE9 199 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 C4orf45Q96LM5 186 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 WDR77Q9BQA1 342 aaPredicted RBP14.16□□□□□ -0.14
LRFN1-201ENST00000248668 ING3Q9NXR8 418 aa14.16□□□□□ -0.14
LRFN1-201ENST00000248668 DXOO77932 396 aaKnown RBP14.15□□□□□ -0.14
LRFN1-201ENST00000248668 SLC26A5P58743 744 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 MFSD13AQ14CX5 517 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 RABEPKQ7Z6M1 372 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 PLPP7Q8NBV4 271 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 ZNF248Q8NDW4 579 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 GPR148Q8TDV2 347 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 ADAMTS14Q8WXS8 1223 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 TRAF4Q9BUZ4 470 aaPredicted RBP14.15□□□□□ -0.14
LRFN1-201ENST00000248668 MED28Q9H204 178 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 METTL7AQ9H8H3 244 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 TMEM14AQ9Y6G1 99 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 IGLV1-36A0A0B4J1U3 117 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 MEIS3P1A6NDR6 274 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 NPIPA5E9PKD4 350 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 PEX14O75381 377 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 KHDRBS3O75525 346 aaKnown RBP14.15□□□□□ -0.14
LRFN1-201ENST00000248668 TLE3Q04726 772 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 SLC17A1Q14916 467 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 CREB3L2Q70SY1 520 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 PPP1R3BQ86XI6 285 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 OR51D1Q8NGF3 324 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 RPS4Y2Q8TD47 263 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 ABHD6Q9BV23 337 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 PPP4R1LQ9P1A2 415 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 NPIPA1Q9UND3 350 aa14.15□□□□□ -0.14
LRFN1-201ENST00000248668 A0A1B0GTQ1 180 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 SLC22A5O76082 557 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 DHFRP00374 187 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 C17orf67Q0P5P2 114 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 YOD1Q5VVQ6 348 aaPredicted RBP14.14□□□□□ -0.15
LRFN1-201ENST00000248668 SLC18B1Q6NT16 456 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 NDUFAF7Q7L592 441 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 LRRTM1Q86UE6 522 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 SMIM4Q8WVI0 70 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 TMEM234Q8WY98 164 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 OR8B4Q96RC9 309 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 FANCFQ9NPI8 374 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 CENPMQ9NSP4 180 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 PHF3Q92576 2039 aaKnown RBP14.14□□□□□ -0.15
LRFN1-201ENST00000248668 A0A1W2PNR3 127 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 MS4A18H0YCH9 400 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 TRIM3O75382 744 aaPredicted RBP14.14□□□□□ -0.15
LRFN1-201ENST00000248668 C1QBP02746 253 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 ZNF28P17035 718 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 EFNB2P52799 333 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 MS4A18Q3C1V0 323 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 LRFN4Q6PJG9 635 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 OIT3Q8WWZ8 545 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 SPSB2Q99619 263 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 TGIF2Q9GZN2 237 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 SMOC1Q9H4F8 434 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 CD1AP06126 327 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 EGR3Q06889 387 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 CPEB2Q7Z5Q1 589 aaKnown RBP14.14□□□□□ -0.15
LRFN1-201ENST00000248668 GPAT4Q86UL3 456 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 DND1Q8IYX4 353 aaKnown RBP14.14□□□□□ -0.15
LRFN1-201ENST00000248668 TCTE3Q8IZS6 198 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 S100A16Q96FQ6 103 aaKnown RBP14.14□□□□□ -0.15
LRFN1-201ENST00000248668 DUSP23Q9BVJ7 150 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 DIABLOQ9NR28 239 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 B3GNT2Q9NY97 397 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 EMC9Q9Y3B6 208 aa14.14□□□□□ -0.15
LRFN1-201ENST00000248668 TMEM212A6NML5 194 aa14.13□□□□□ -0.15
LRFN1-201ENST00000248668 FTCDNL1E5RQL4 147 aa14.13□□□□□ -0.15
LRFN1-201ENST00000248668 TEX46H3BTG2 121 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms