RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 FN3KRPQ9HA64 309 aa12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 SEBOXQ9HB31 216 aaPredicted RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 MRPS2Q9Y399 296 aaKnown RBP12.86□□□□□ -0.35
PCDHB3-201ENST00000231130 A0A087X0M5 115 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 A0A1B0GX30 115 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 OR2F2O95006 317 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 SERPINA5P05154 406 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 CT62P0C5K7 136 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 SLC35G6P0C7Q6 338 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 ERGP11308 486 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 MUC1P15941 1255 aaPredicted RBP12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 PEBP1P30086 187 aaKnown RBP12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 RAB5CP51148 216 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 SKP1P63208 163 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 OR2F1Q13607 317 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 RSU1Q15404 277 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 PLPP7Q8NBV4 271 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 RNF141Q8WVD5 230 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 DCUN1D4Q92564 292 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 DEFB118Q96PH6 123 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 NRIP2Q9BQI9 281 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 METTL1Q9UBP6 276 aaKnown RBP12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 HEATR5AQ86XA9 2040 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 A0A1W2PP55 124 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 CPED1A4D0V7 1026 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 FGF17O60258 216 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 MOSPD3O75425 235 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 AMY2AP04746 511 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 DCNP07585 359 aaKnown RBP12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 PGAM2P15259 253 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 LAG3P18627 525 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 CCKBRP32239 447 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 PPM1FP49593 454 aaPredicted RBP12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 RNF4P78317 190 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 DPTQ07507 201 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 ARHGAP40Q5TG30 622 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 VN1R4Q7Z5H5 301 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 OR4A4PQ8NGN8 299 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 CD300LFQ8TDQ1 290 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 CCDC107Q8WV48 283 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 ALG12Q9BV10 488 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 APMAPQ9HDC9 416 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 SERGEFQ9UGK8 458 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 KLHDC2Q9Y2U9 406 aa12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 MRPS23Q9Y3D9 190 aaKnown RBP12.85□□□□□ -0.35
PCDHB3-201ENST00000231130 A0A1B0GV50 99 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 EPCAMP16422 314 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 ZNF28P17035 718 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 CEBPBP17676 345 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 ZNF77Q15935 545 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 PYY3Q5JQD4 70 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 OR2L13Q8N349 312 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 TMEM52Q8NDY8 209 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 MIB2Q96AX9 1013 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 RGCCQ9H4X1 137 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 RXFP3Q9NSD7 469 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 P2RX6O15547 441 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 ZNF208O43345 1280 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 EIF4E2O60573 245 aaKnown RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 OR4E1P0C645 316 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 CASRP41180 1078 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 FAM53BQ14153 422 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 ACTBL2Q562R1 376 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 PSRC1Q6PGN9 363 aaPredicted RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 KIRREL2Q6UWL6 708 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 DPY19L4Q7Z388 723 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 FOXRED2Q8IWF2 684 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 DMBX1Q8NFW5 382 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 TMEM68Q96MH6 324 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 ELF4Q99607 663 aaPredicted RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 RNASEK-C17orf49H0YIS7 233 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 SULT2B1O00204 365 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 OR10H2O60403 315 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 IFNA2P01563 188 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 HLA-AP01891 365 aaKnown RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 MT-ND4LP03901 98 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 RAB6AP20340 208 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 POU3F4P49335 361 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 HTRA4P83105 476 aaPredicted RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 CDNFQ49AH0 187 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 ZNF585AQ6P3V2 769 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 TMEM205Q6UW68 189 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 SLC35D2Q76EJ3 337 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 ABHD13Q7L211 337 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 SLC36A1Q7Z2H8 476 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 C12orf76Q8N812 135 aaPredicted RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 NECAB3Q96P71 396 aaPredicted RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 PISDQ9UG56 409 aa12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 CARHSP1Q9Y2V2 147 aaKnown RBP12.84□□□□□ -0.35
PCDHB3-201ENST00000231130 EDDM13A0A1B0GTR0 161 aa12.83□□□□□ -0.36
PCDHB3-201ENST00000231130 B3GALT2O43825 422 aa12.83□□□□□ -0.36
PCDHB3-201ENST00000231130 GLSO94925 669 aaPredicted RBP12.83□□□□□ -0.36
PCDHB3-201ENST00000231130 SLC34A2O95436 690 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms