RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 RAP2BP61225 183 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 RAC1P63000 192 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 ACKR1Q16570 336 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 NHSL2Q5HYW2 709 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 PARP16Q8N5Y8 322 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 NANPQ8TBE9 248 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 OXGR1Q96P68 337 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 PPT2Q9UMR5 302 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 FAM96BQ9Y3D0 163 aa17.32■□□□□ 0.36
SMPD3-201ENST00000219334 TRAV17A0A0B4J275 112 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 FBXO24O75426 580 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 MT-CO3P00414 261 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 MCCD1P59942 119 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 DUSP8Q13202 625 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 DHRS13Q6UX07 377 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 OVCH1Q7RTY7 1134 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 OR52I1Q8NGK6 324 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 PAQR8Q8TEZ7 354 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 HMGN4O00479 90 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 CBR3O75828 277 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 GLAP06280 429 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 PSMB1P20618 241 aaKnown RBP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 ECI1P42126 302 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 PLA2G7Q13093 441 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 EMC4Q5J8M3 183 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 LYPD4Q6UWN0 246 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 OR11G2Q8NGC1 345 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 PRRX2Q99811 253 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 OR11A1Q9GZK7 315 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 KCNIP2Q9NS61 270 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 SLC17A4Q9Y2C5 497 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 BTAF1O14981 1849 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 MYH15Q9Y2K3 1946 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 C5orf49A4QMS7 147 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 TMEM11P17152 192 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 TRA2AQ13595 282 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 PTRH1Q86Y79 214 aaKnown RBP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 OR10J5Q8NHC4 309 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 TUBB1Q9H4B7 451 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 TXNL4BQ9NX01 149 aaKnown RBP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 KLK4Q9Y5K2 254 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 A0A087WV62 115 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 A0A096LPE4 126 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 A0A1W2PPZ6 126 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 MEIOCA2RUB1 952 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 ZNF195O14628 629 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 HRO43593 1189 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 UBL3O95164 117 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 XKR7Q5GH72 579 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 NLRC3Q7RTR2 1065 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 RIMS4Q9H426 269 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 KIAA1456Q9P272 454 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 PIAS2O75928 621 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 MYF5P13349 255 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 SUB1P53999 127 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 DPPA2Q7Z7J5 298 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 LIN37Q96GY3 246 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 LINC00615Q96LM1 132 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-201ENST00000219334 SLC22A11Q9NSA0 550 aa17.31■□□□□ 0.36
SMPD3-201ENST00000219334 SH2D1BO14796 132 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 RPA2P15927 270 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 ZNF74Q16587 644 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 ZNF718Q3SXZ3 478 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 ENTHD1Q8IYW4 607 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 SLAMF6Q96DU3 332 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 GMPR2Q9P2T1 348 aaKnown RBP17.3■□□□□ 0.36
SMPD3-201ENST00000219334 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 BOLA2-SMG1P6H3BVE0 249 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 SORDQ00796 357 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 PMPCAQ10713 525 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 ARIH2OSQ8N7S6 290 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 MOB1AQ9H8S9 216 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 TMEM30AQ9NV96 361 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 SLC5A6Q9Y289 635 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 TCTN3Q6NUS6 607 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 STEAP1BQ6NZ63 245 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 TMEM81Q6P7N7 255 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 RBM45Q8IUH3 476 aaKnown RBP17.3■□□□□ 0.36
SMPD3-201ENST00000219334 FAM185AQ8N0U4 392 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 DEFB124Q8NES8 71 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 GIMAP1Q8WWP7 306 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 TTC9Q92623 222 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 CD300AQ9UGN4 299 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 M0R135 149 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 SDHAP31040 664 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 MRPS34P82930 218 aaKnown RBP17.3■□□□□ 0.36
SMPD3-201ENST00000219334 TCTEX1D2Q8WW35 142 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 HPSE2Q8WWQ2 592 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 ZNF799Q96GE5 643 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 NUDT9Q9BW91 350 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 OPA3Q9H6K4 179 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 GALNT9Q9HCQ5 603 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 B3GALT5Q9Y2C3 310 aa17.3■□□□□ 0.36
SMPD3-201ENST00000219334 F6UZH7 168 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 GLRA1P23415 457 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 DBPQ10586 325 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-201ENST00000219334 BEX5Q5H9J7 111 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 CLDN22Q8N7P3 220 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 CNTNAP3Q9BZ76 1288 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms