RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 SLC25A30Q5SVS4 291 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 OR7E24Q6IFN5 339 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 ZNF627Q7L945 461 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 C1orf162Q8NEQ5 155 aaPredicted RBP23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 TEAD3Q99594 435 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 HDHD5Q9BXW7 423 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 ACTR6Q9GZN1 396 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 Q9H521 79 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 SIAEQ9HAT2 523 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 A0A1W2PR80 420 aa23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 OR8G3PP0DMU2 310 aa23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 GSTT1P30711 240 aa23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 CAPZA2P47755 286 aa23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 SMN1Q16637 294 aaKnown RBP23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 LCN1P1Q5VSP4 162 aa23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 RFKQ969G6 155 aa23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 Q96MT0 163 aa23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 MRPL22Q9NWU5 206 aaKnown RBP23.87■■□□□ 1.41
CHMP4B-201ENST00000217402 SLC22A31A6NKX4 558 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 FARS2O95363 451 aaKnown RBP23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 HTR1FP30939 366 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 HOXC12P31275 282 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 TUBA1BP68363 451 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 TUBA4AP68366 448 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 TEKQ02763 1124 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 SNTB1Q13884 538 aaKnown RBP23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 TUBA1AQ71U36 451 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 SKA3Q8IX90 412 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 STEAP2Q8NFT2 490 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 WDR76Q9H967 626 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 POLR1DQ9Y2S0 133 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 COMMD3-BMI1R4GMX3 469 aa23.86■■□□□ 1.41
CHMP4B-201ENST00000217402 MRPL3P09001 348 aaKnown RBP23.85■■□□□ 1.41
CHMP4B-201ENST00000217402 ADAM8P78325 824 aa23.85■■□□□ 1.41
CHMP4B-201ENST00000217402 CDK5R2Q13319 367 aa23.85■■□□□ 1.41
CHMP4B-201ENST00000217402 ERI1Q8IV48 349 aaKnown RBP23.85■■□□□ 1.41
CHMP4B-201ENST00000217402 OR10H5Q8NGA6 315 aa23.85■■□□□ 1.41
CHMP4B-201ENST00000217402 ZNF416Q9BWM5 594 aa23.85■■□□□ 1.41
CHMP4B-201ENST00000217402 AMBNQ9NP70 447 aa23.85■■□□□ 1.41
CHMP4B-201ENST00000217402 SELENOFO60613 162 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 NAA10P41227 235 aaPredicted RBP23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 BLVRAP53004 296 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 NRN1LQ496H8 165 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 FAM27BQ5VT28 67 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 SLC16A14Q7RTX9 510 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 OR52N5Q8NH56 324 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 NPDC1Q9NQX5 325 aaPredicted RBP23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 SLC17A5Q9NRA2 495 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 CACNA1CQ13936 2221 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 DOPEY1Q5JWR5 2465 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 CLEC18AA5D8T8 446 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 OR5H1A6NKK0 313 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 HLA-HP01893 362 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 PATE4P0C8F1 98 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 ZNF823P16415 610 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 RPS27P42677 84 aaKnown RBP23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 UBE2NP61088 152 aaKnown RBP23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 ENDOGQ14249 297 aaKnown RBP23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 CLEC18BQ6UXF7 455 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 C17orf78Q8N4C9 275 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 CLEC18CQ8NCF0 446 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 FBLIM1Q8WUP2 373 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 INTS14Q96SY0 518 aa23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 WARS2Q9UGM6 360 aaKnown RBP23.84■■□□□ 1.41
CHMP4B-201ENST00000217402 ZNF503-AS2A6NEH8 195 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 SNTNA6NMZ2 147 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 APOL3O95236 402 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 HRGP04196 525 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 KCNMB1Q16558 191 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 KRT80Q6KB66 452 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 ALKBH2Q6NS38 261 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 OR51G2Q8NGK0 314 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 OR6N2Q8NGY6 317 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 FGFBP3Q8TAT2 258 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 ZNF224Q9NZL3 707 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 PCDHGB5Q9Y5G0 923 aa23.83■■□□□ 1.41
CHMP4B-201ENST00000217402 SPTBN1Q01082 2364 aaKnown RBP23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 DENRO43583 198 aaKnown RBP23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 SPARCP09486 303 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 PSKH1P11801 424 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 CD79AP11912 226 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 ZNF91Q05481 1191 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 PIGFQ07326 219 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 LAIR2Q6ISS4 152 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 LINC00346Q8IVM7 164 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 TIGD4Q8IY51 512 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 WDR31Q8NA23 367 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 SMAP2Q8WU79 429 aaPredicted RBP23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 FBXO17Q96EF6 278 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 RNFT2Q96EX2 444 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 ASH2LQ9UBL3 628 aa23.82■■□□□ 1.4
CHMP4B-201ENST00000217402 CST2P09228 141 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 MTNR1AP48039 350 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 ENTPD1P49961 510 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 LSM6P62312 80 aaKnown RBP23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 GGTLC2Q14390 218 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 CORO6Q6QEF8 472 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 C22orf34Q6ZV56 151 aa23.81■■□□□ 1.4
CHMP4B-201ENST00000217402 SHFQ7M4L6 423 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms