RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ATF6BQ99941 703 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 TAF9BQ9HBM6 251 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC22A13Q9Y226 551 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 FBXO7Q9Y3I1 522 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 CR2P20023 1033 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 SNRPNP63162 240 aaKnown RBP12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 C17orf107Q6ZR85 190 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 NLRC3Q7RTR2 1065 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 BAGE3Q86Y29 109 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 BAGE2Q86Y30 109 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 RNF113BQ8IZP6 322 aaKnown RBP12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 DUSP23Q9BVJ7 150 aa12.46□□□□□ -0.41
TGFBR3-201ENST00000212355 SLC16A6O15403 523 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 DNAJB6O75190 326 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 BCKDHBP21953 392 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 AADACP22760 399 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 FABP5Q01469 135 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 RNF151Q2KHN1 245 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 OR1S2Q8NGQ3 325 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 MS4A6EQ96DS6 147 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 KRBOX1C9JBD0 128 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 CLEC3BP05452 202 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 DEFA4P12838 97 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 ADPRHP54922 357 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 MRPS10P82664 201 aaKnown RBP12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 GUCA2AQ02747 115 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 HACD4Q5VWC8 232 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC22A24Q8N4F4 322 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 TMEM104Q8NE00 496 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 HINT3Q9NQE9 182 aaKnown RBP12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC22A7Q9Y694 548 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 V9GYS6 101 aa12.46□□□□□ -0.42
TGFBR3-201ENST00000212355 A0A0D9SG52 128 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 DCTN6O00399 190 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 CER1O95813 267 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 PCBD1P61457 104 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 RAB11AP62491 216 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 TOR2AQ5JU69 321 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 RFPL4BQ6ZWI9 263 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 GOT1L1Q8NHS2 421 aaPredicted RBP12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 ABHD6Q9BV23 337 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 AQP7P3A6NL99 342 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 APOA2P02652 100 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 GABRA4P48169 554 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 C17orf67Q0P5P2 114 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 OPN5Q6U736 354 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 CCDC74AQ96AQ1 378 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 QPCTLQ9NXS2 382 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 S100A11P31949 105 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC25A46Q96AG3 418 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 PPP2CBP62714 309 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 PPP2CAP67775 309 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 LIPNQ5VXI9 398 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 TMEM88Q6PEY1 159 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 ADAMTSL4Q6UY14 1074 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 QDPRP09417 244 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 ISL1P61371 349 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 SPATA46Q5T0L3 261 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 LRRC56Q8IYG6 542 aaPredicted RBP12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 OR2G3Q8NGZ4 309 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 PPP1R35Q8TAP8 253 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 UBTD2Q8WUN7 234 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 NUDCD2Q8WVJ2 157 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 NRTNQ99748 197 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 PBX4Q9BYU1 374 aa12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 FAM212BQ9NTI7 297 aaPredicted RBP12.45□□□□□ -0.42
TGFBR3-201ENST00000212355 C17orf113A0A1B0GUU1 675 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 DEGS1O15121 323 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 GABARAPO95166 117 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 CTSLP07711 333 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 THBS1P07996 1170 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 NDUFB7P17568 137 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 SAXO2Q658L1 398 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 MDGA2Q7Z553 956 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 BTLAQ7Z6A9 289 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 HLA-CQ95604 372 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 SPNS1Q9H2V7 528 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 GLCEO94923 617 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 OR8U8P0C7N1 319 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC35A1P78382 337 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 Q7L0L9 218 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ADGRE4PQ86SQ3 457 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 PINX1Q96BK5 328 aaKnown RBP12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 C1QTNF3Q9BXJ4 246 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ZDHHC5Q9C0B5 715 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 OR52A5Q9H2C5 316 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 NT5DC2Q9H857 520 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ZFP57Q9NU63 452 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 RNF150Q9ULK6 438 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 TOPAZ1Q8N9V7 1692 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 AGAP14A8MT82 685 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 KCNK2O95069 426 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 UBL3O95164 117 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 HMGA1P17096 107 aaKnown RBP12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 F2RL1P55085 397 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms