RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 DUSP1P28562 367 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RPS5P46782 204 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 ALKBH6Q3KRA9 238 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CLEC20AQ6ZU45 233 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 LHFPL2Q6ZUX7 228 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR52M1Q8NGK5 317 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR4Q3Q8NH05 313 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CCL27Q9Y4X3 112 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 PEX10O60683 326 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 VAMP5O95183 116 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TXNRD3NBQ6F5E7 133 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 GPR119Q8TDV5 335 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ACTR3CQ9C0K3 210 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF552Q9H707 407 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF71Q9NQZ8 489 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 RHCGQ9UBD6 479 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RNF11Q9Y3C5 154 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 WDR81Q562E7 1941 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 HPRP00739 348 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 PPP3CBP16298 524 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OPRM1P35372 400 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SPINT3P49223 89 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TRA2AQ13595 282 aaKnown RBP eCLIP3.17□□□□□ -1.9
NEB-201ENST00000172853 TRIP6Q15654 476 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 STARD4Q96DR4 205 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SNX22Q96L94 193 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ACPTQ9BZG2 426 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FGF21Q9NSA1 209 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 BOLA1Q9Y3E2 137 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TLCD2A6NGC4 264 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CCL22O00626 93 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 NUDT3O95989 172 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FCRL6Q6DN72 434 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 COX15Q7KZN9 410 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SPICQ8N5J4 248 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FGF13Q92913 245 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 C12orf42Q96LP6 360 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 NEURL2Q9BR09 285 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CLMPQ9H6B4 373 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SLC17A7Q9P2U7 560 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF609O15014 1411 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 A0A1B0GUH1 482 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 M0R135 149 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 GABRPO00591 440 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SPRY3O43610 288 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 DHRS3O75911 302 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CEBPBP17676 345 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 APOBEC1P41238 236 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 CASP3P42574 277 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 WDR25Q64LD2 544 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 C18orf63Q68DL7 685 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 NHLRC1Q6VVB1 395 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 YRDCQ86U90 279 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 NAXDQ8IW45 347 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 DUSP19Q8WTR2 217 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF799Q96GE5 643 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FZD8Q9H461 694 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 POFUT1Q9H488 388 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SLCO1B3Q9NPD5 702 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 HSPB11Q9Y547 144 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RETP07949 1114 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TMIGD3P0DMS9 266 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 OR1D4P47884 311 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CLDN2P57739 230 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CD226Q15762 336 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 IGFBP7Q16270 282 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 DTWD2Q8NBA8 298 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CMASQ8NFW8 434 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 CTDSP1Q9GZU7 261 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 DDX4Q9NQI0 724 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 INPP5EQ9NRR6 644 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FAM212BQ9NTI7 297 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 MED9Q9NWA0 146 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FOXJ3Q9UPW0 622 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 A0A1B0GX78 115 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ADAM10O14672 748 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 GLULP15104 373 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 IMPA1P29218 277 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CNN1P51911 297 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 PCBP3P57721 371 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 CLN3Q13286 438 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 IRF4Q15306 451 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 FDX2Q6P4F2 183 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 RSPO2Q6UXX9 243 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 GLB1L2Q8IW92 636 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 MISP3Q96FF7 219 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SLC26A1Q9H2B4 701 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 HRH4Q9H3N8 390 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 LTB4R2Q9NPC1 389 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 KCMF1Q9P0J7 381 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 OR8G3PP0DMU2 310 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 PROZP22891 400 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 SLC10A6Q3KNW5 377 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TRAT1Q6PIZ9 186 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 CXorf21Q9HAI6 301 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 ZNF256Q9Y2P7 627 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 HPP00738 406 aa3.17□□□□□ -1.9
NEB-201ENST00000172853 TAL1P17542 331 aaPredicted RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 NUTF2P61970 127 aaKnown RBP3.17□□□□□ -1.9
NEB-201ENST00000172853 RPL7AP62424 266 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms