RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 POFUT1Q9H488 388 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FBXO34Q9NWN3 711 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SALL4Q9UJQ4 1053 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 LCTP09848 1927 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SH2D1BO14796 132 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SUSD5O60279 629 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 BCL6P41182 706 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 DCDP81605 110 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 NR0B2Q15466 257 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SDHAF4Q5VUM1 108 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RPL7L1Q6DKI1 246 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF343Q6P1L6 599 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 DHRS4L2Q6PKH6 230 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 BTNL3Q6UXE8 466 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FAM3DQ96BQ1 224 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PRR11Q96HE9 360 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 GMPPAQ96IJ6 420 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 FRMPD3Q5JV73 1810 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 A0A0D9SEW6 157 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TNFRSF10CO14798 259 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SCO2O43819 266 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 PPP1R3DO95685 299 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SNRNP70P08621 437 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RPA2P15927 270 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 HOXD11P31277 338 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SPCS3P61009 180 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 MFAP5Q13361 173 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 ELAVL1Q15717 326 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SUSD1Q6UWL2 747 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CREB3L4Q8TEY5 395 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SDSLQ96GA7 329 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 VAMP8Q9BV40 100 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 CHRNA10Q9GZZ6 450 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OBP2BQ9NPH6 170 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 B3GALT5Q9Y2C3 310 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 A0A087WV62 115 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 DSCR3O14972 297 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 STC2O76061 302 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OPN1MWP04001 364 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OPN1MW2P0DN77 364 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 OPN1MW3P0DN78 364 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 LAMP1P11279 417 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 BAXQ07812 192 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 HLXQ14774 488 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 RPS19BP1Q86WX3 136 aaKnown RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TCTEX1D1Q8N7M0 179 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SUCNR1Q9BXA5 334 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 SEBOXQ9HB31 216 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TRAPPC2LQ9UL33 140 aa5.61□□□□□ -1.51
VPS13D-201ENST00000011700 TRABD2BA6NFA1 517 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 MTX2O75431 263 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 PDGFAP04085 211 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 TCRBP04435 133 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 GLULP15104 373 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 VIPR2P41587 438 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 HTR4Q13639 388 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 ENTPD8Q5MY95 495 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 Q6ZVL8 140 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 DUS3LQ96G46 650 aaKnown RBP5.6□□□□□ -1.51
VPS13D-201ENST00000011700 SH3BGRL3Q9H299 93 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 TMED3Q9Y3Q3 217 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 ZCWPW2A0A1B0GU75 182 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 A0A1W2PN81 502 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 OR6C68A6NDL8 312 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 HRASP01112 189 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 SMIM6P0DI80 62 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 CHRNA7P36544 502 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 RAD52P43351 418 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 SLC6A11P48066 632 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF140P52738 457 aaPredicted RBP5.6□□□□□ -1.51
VPS13D-201ENST00000011700 ATP6V1FQ16864 119 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 MIDNQ504T8 468 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 FAM209AQ5JX71 171 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 OR10Z1Q8NGY1 313 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 ATG101Q9BSB4 218 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM231Q9H6L2 316 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 DYNLRB1Q9NP97 96 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 HAO2Q9NYQ3 351 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 HS3ST3A1Q9Y663 406 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 A6NDN8 102 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 UQCRFS1P47985 274 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 SLC11A1P49279 550 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 PPP1CBP62140 327 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 BTN1A1Q13410 526 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 ARFGAP1Q8N6T3 406 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 LCORQ96JN0 433 aaPredicted RBP5.6□□□□□ -1.51
VPS13D-201ENST00000011700 OR7D2Q96RA2 312 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 KCNA7Q96RP8 456 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 NPAS1Q99742 590 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 C1QTNF3Q9BXJ4 246 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 ACPTQ9BZG2 426 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 G3V3Q6 166 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 HNF1AP20823 631 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 GDNFP39905 211 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 GDF5P43026 501 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 RPS25P62851 125 aaKnown RBP5.6□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM128Q5BJH2 165 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 CLRN3Q8NCR9 226 aa5.6□□□□□ -1.51
VPS13D-201ENST00000011700 NDRG2Q9UN36 371 aaKnown RBP5.6□□□□□ -1.51
VPS13D-201ENST00000011700 USP22Q9UPT9 525 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms