RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Vmn1r66Q8K4I0 310 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Naa40Q8VE10 237 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Sytl3Q99N48 607 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cthrc1Q9D1D6 245 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm10800D3Z496 220 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Kcnmb3E9Q7U0 239 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm8024L7N2E0 100 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 EndogO08600 294 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Mc3rP33033 323 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Msto1Q2YDW2 556 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Smad2Q62432 467 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 MaoaQ64133 526 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Frg2f1Q6P3A2 227 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Zfp157Q6PCM4 567 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 2610318N02RikQ80VT5 305 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc38a9Q8BGD6 560 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr668Q8VGW3 318 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gfod2Q9CYH5 385 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Bpnt1Q9Z0S1 308 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ice1E9Q286 2241 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Trbv2A0A0B4J1G8 114 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Macc1E9PXX8 851 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm5039J3QNT6 144 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tdpoz1P0DMR5 365 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cd82P40237 266 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 ArntP53762 791 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 PkiaP63248 76 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Kcnk6Q3TBV4 313 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Heatr6Q6P1G0 1184 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cpt1cQ8BGD5 798 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn1r189Q8K3N3 312 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr969Q8VG89 311 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr656Q8VGX9 329 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Acot12Q9DBK0 556 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gpr88Q9EPB7 384 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 SrpxQ9R0M3 464 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ak4Q9WUR9 223 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tox2A2A472 547 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tmem265E9Q8G3 109 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Mmp25Q3U435 615 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Fam199xQ8K2D0 388 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Dus3lQ91XI1 637 aaKnown RBP9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Sfxn1Q99JR1 322 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Hspb2Q99PR8 182 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr944Q9EQ91 311 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gng13Q9JMF3 67 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cln8Q9QUK3 288 aa9.41□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm45716A0A1B0GRQ0 93 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Oosp3G5E8D7 195 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Klrk1O54709 232 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gpr143P70259 405 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 IhhP97812 411 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Fam187bQ0VAY3 358 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tas2r107Q7M725 308 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 P2ry10bQ8BY68 352 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cyb5bQ9CQX2 146 aaKnown RBP9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ceacam18Q9D871 376 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr710Q9EP55 310 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Dusp13Q9QYJ7 198 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1224-ps1A3KGY4 311 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 H2-T10F6T1I5 379 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cxcl9P18340 126 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Hsd3b2P26149 373 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 EbpP70245 230 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 LpoQ5SW46 710 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Cr1lQ64735 483 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc26a11Q80ZD3 593 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Chst8Q8BQ86 417 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ppp1r3eQ8BRJ4 279 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gpr152Q8BXS7 511 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Tmem45bQ8VCZ2 278 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 HnrnpllQ921F4 591 aaKnown RBP9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Ces2gE9PV38 560 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gpr25P0C5I1 358 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Rab42Q0PD08 215 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 MocosQ14CH1 862 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Med19Q8C1S0 244 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn1r212Q8R268 357 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1141Q8VFQ7 311 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Adarb1Q91ZS8 711 aaKnown RBP9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Insm2Q9JMC2 493 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Serinc1Q9QZI8 453 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm8225D3Z536 292 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Adap1E9PY16 374 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr173E9QAT7 321 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Vmn2r13L7N1X2 831 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Gm5460Q3UQ97 254 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Slc17a4Q5NCM1 492 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 PtprcapQ64697 197 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Il20raQ6PHB0 546 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 B630019K06RikQ7TNS5 333 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Pramel5Q7TPY4 500 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Alg12Q8VDB2 486 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1449Q8VEV8 314 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Mrpl41Q9CQN7 135 aaKnown RBP9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Fbxo6Q9QZN4 295 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Olfr1255A2AUA4 310 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Amy1P00687 511 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 MagP20917 626 aa9.4□□□□□ -0.9
Ubr1-201ENSMUST00000028728 Traf4Q61382 470 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms