RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W GIN4Q12263 1142 aa4.4□□□□□ -1.7
CST9YLR394W CAD1P24813 409 aaKnown RBP4.39□□□□□ -1.71
CST9YLR394W CCR4P31384 837 aaKnown RBP4.39□□□□□ -1.71
CST9YLR394W GRX4P32642 244 aa4.39□□□□□ -1.71
CST9YLR394W SUL1P38359 859 aa4.39□□□□□ -1.71
CST9YLR394W SAK1P38990 1142 aa4.39□□□□□ -1.71
CST9YLR394W VHR1P40522 640 aa4.39□□□□□ -1.71
CST9YLR394W PFA3P42836 336 aa4.39□□□□□ -1.71
CST9YLR394W BNA2P47125 453 aa4.39□□□□□ -1.71
CST9YLR394W HLJ1P48353 224 aa4.39□□□□□ -1.71
CST9YLR394W SDA1P53313 767 aaKnown RBP4.39□□□□□ -1.71
CST9YLR394W MCH5Q08777 521 aa4.39□□□□□ -1.71
CST9YLR394W KTR4P38131 464 aa4.38□□□□□ -1.71
CST9YLR394W RPN10P38886 268 aaKnown RBP4.38□□□□□ -1.71
CST9YLR394W YJR096WP47137 282 aa4.38□□□□□ -1.71
CST9YLR394W TRP4P07285 380 aaPredicted RBP4.38□□□□□ -1.71
CST9YLR394W CUE2P36075 443 aaKnown RBP4.38□□□□□ -1.71
CST9YLR394W TYS1P36421 394 aaKnown RBP4.38□□□□□ -1.71
CST9YLR394W HSL7P38274 827 aa4.38□□□□□ -1.71
CST9YLR394W ARP4P80428 489 aa4.38□□□□□ -1.71
CST9YLR394W LGE1Q02796 332 aaKnown RBP4.38□□□□□ -1.71
CST9YLR394W LEE1Q02799 301 aaKnown RBP4.38□□□□□ -1.71
CST9YLR394W COG8Q04632 607 aa4.38□□□□□ -1.71
CST9YLR394W OMS1Q06668 471 aa4.38□□□□□ -1.71
CST9YLR394W PEX19Q07418 342 aa4.38□□□□□ -1.71
CST9YLR394W ERG4P25340 473 aa4.37□□□□□ -1.71
CST9YLR394W CTF13P35203 478 aa4.37□□□□□ -1.71
CST9YLR394W GPP1P41277 250 aaKnown RBP4.37□□□□□ -1.71
CST9YLR394W STB4P50104 949 aa4.37□□□□□ -1.71
CST9YLR394W NPY1P53164 384 aa4.37□□□□□ -1.71
CST9YLR394W MTQ2Q03920 221 aaPredicted RBP4.37□□□□□ -1.71
CST9YLR394W GUD1Q07729 489 aa4.37□□□□□ -1.71
CST9YLR394W IRC10Q08118 586 aa4.37□□□□□ -1.71
CST9YLR394W SWM1Q12379 170 aa4.37□□□□□ -1.71
CST9YLR394W TRM13Q12383 476 aa4.37□□□□□ -1.71
CST9YLR394W YLR415CO13578 112 aa4.36□□□□□ -1.71
CST9YLR394W TSR4P25040 408 aa4.36□□□□□ -1.71
CST9YLR394W MNN4P36044 1178 aa4.36□□□□□ -1.71
CST9YLR394W YKR018CP36114 725 aa4.36□□□□□ -1.71
CST9YLR394W PZF1P39933 429 aa4.36□□□□□ -1.71
CST9YLR394W YEN1P40028 759 aa4.36□□□□□ -1.71
CST9YLR394W UME1Q03010 460 aa4.36□□□□□ -1.71
CST9YLR394W ACF2Q12168 779 aa4.36□□□□□ -1.71
CST9YLR394W MON2P48563 1636 aaPredicted RBP4.35□□□□□ -1.71
CST9YLR394W MIP6P38760 659 aaKnown RBP4.35□□□□□ -1.71
CST9YLR394W YFL052WP43551 465 aa4.35□□□□□ -1.71
CST9YLR394W MTR3P48240 250 aaPredicted RBP4.35□□□□□ -1.71
CST9YLR394W RPN7Q06103 429 aaKnown RBP4.35□□□□□ -1.71
CST9YLR394W DCS2Q12123 353 aa4.35□□□□□ -1.71
CST9YLR394W RPP1P38786 293 aa4.34□□□□□ -1.71
CST9YLR394W CKB2P38930 258 aa4.34□□□□□ -1.71
CST9YLR394W PMT3P47190 753 aa4.34□□□□□ -1.71
CST9YLR394W YGR237CP50089 785 aa4.34□□□□□ -1.71
CST9YLR394W BRE5P53741 515 aaKnown RBP4.34□□□□□ -1.71
CST9YLR394W TIM44Q01852 431 aa4.34□□□□□ -1.71
CST9YLR394W INO80P53115 1489 aa4.33□□□□□ -1.72
CST9YLR394W PRP19P32523 503 aaKnown RBP4.33□□□□□ -1.72
CST9YLR394W DOT6P40059 670 aaKnown RBP4.33□□□□□ -1.72
CST9YLR394W PCL10P53124 433 aa4.33□□□□□ -1.72
CST9YLR394W YGL081WP53156 320 aa4.33□□□□□ -1.72
CST9YLR394W RNT1Q02555 471 aa4.33□□□□□ -1.72
CST9YLR394W YMR206WQ03695 313 aa4.33□□□□□ -1.72
CST9YLR394W TGL5Q12043 749 aa4.33□□□□□ -1.72
CST9YLR394W TRM11Q12463 433 aa4.33□□□□□ -1.72
CST9YLR394W NUP145P49687 1317 aa4.32□□□□□ -1.72
CST9YLR394W SIC1P38634 284 aa4.32□□□□□ -1.72
CST9YLR394W FKH2P41813 862 aa4.32□□□□□ -1.72
CST9YLR394W MUK1Q02866 612 aa4.32□□□□□ -1.72
CST9YLR394W PKH1Q03407 766 aa4.32□□□□□ -1.72
CST9YLR394W PPR1P07272 904 aaPredicted RBP4.31□□□□□ -1.72
CST9YLR394W ADE2P21264 571 aaKnown RBP4.31□□□□□ -1.72
CST9YLR394W ERG6P25087 383 aaKnown RBP4.31□□□□□ -1.72
CST9YLR394W SSZ1P38788 538 aaKnown RBP4.31□□□□□ -1.72
CST9YLR394W ALG7P07286 448 aa4.3□□□□□ -1.72
CST9YLR394W MTH1P35198 433 aa4.3□□□□□ -1.72
CST9YLR394W YHR112CP38716 378 aa4.3□□□□□ -1.72
CST9YLR394W HXT6P39003 570 aaKnown RBP4.3□□□□□ -1.72
CST9YLR394W HXT7P39004 570 aa4.3□□□□□ -1.72
CST9YLR394W OAF1P39720 1047 aaPredicted RBP4.3□□□□□ -1.72
CST9YLR394W NUG1P40010 520 aaKnown RBP4.3□□□□□ -1.72
CST9YLR394W GID8P40208 455 aa4.3□□□□□ -1.72
CST9YLR394W CCT5P40413 562 aaKnown RBP4.3□□□□□ -1.72
CST9YLR394W YJR039WP47107 1121 aa4.3□□□□□ -1.72
CST9YLR394W TEX1P53851 422 aaKnown RBP4.3□□□□□ -1.72
CST9YLR394W ECM9Q02202 377 aa4.3□□□□□ -1.72
CST9YLR394W NRG1Q03125 231 aa4.3□□□□□ -1.72
CST9YLR394W RGC1Q06108 1083 aaKnown RBP4.3□□□□□ -1.72
CST9YLR394W FAP7Q12055 197 aaPredicted RBP4.3□□□□□ -1.72
CST9YLR394W RPS21BQ3E754 87 aaKnown RBP4.3□□□□□ -1.72
CST9YLR394W DAL3P32459 195 aa4.29□□□□□ -1.72
CST9YLR394W AKL1P38080 1108 aaKnown RBP4.29□□□□□ -1.72
CST9YLR394W BEM4P39011 633 aa4.29□□□□□ -1.72
CST9YLR394W YJR120WP47157 116 aa4.29□□□□□ -1.72
CST9YLR394W PRP31P49704 494 aaPredicted RBP4.29□□□□□ -1.72
CST9YLR394W ARG5,6Q01217 863 aa4.29□□□□□ -1.72
CST9YLR394W NDJ1Q12366 352 aa4.29□□□□□ -1.72
CST9YLR394W RPS21AP0C0V8 87 aaKnown RBP4.29□□□□□ -1.72
CST9YLR394W YBR053CP38235 358 aa4.29□□□□□ -1.72
CST9YLR394W LYS9P38999 446 aa4.29□□□□□ -1.72
CST9YLR394W GZF3P42944 551 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms