RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SMC5Q8IY18 1101 aa21.41■■□□□ 1.02
PHGDH-234ENST00000642041 CTU1Q7Z7A3 348 aaKnown RBP21.4■■□□□ 1.02
PHGDH-234ENST00000642041 ZBTB47Q9UFB7 747 aaPredicted RBP21.4■■□□□ 1.02
PHGDH-234ENST00000642041 FAM177BA6PVY3 158 aa21.39■■□□□ 1.01
PHGDH-234ENST00000642041 IGHDP01880 384 aa21.39■■□□□ 1.01
PHGDH-234ENST00000642041 FAM155AB1AL88 458 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-234ENST00000642041 GTF2E1P29083 439 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-234ENST00000642041 PIP4K2AP48426 406 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-234ENST00000642041 RNF186Q9NXI6 227 aa21.38■■□□□ 1.01
PHGDH-234ENST00000642041 TNNQ9UQP3 1299 aa21.38■■□□□ 1.01
PHGDH-234ENST00000642041 TRPA1O75762 1119 aa21.37■■□□□ 1.01
PHGDH-234ENST00000642041 EIF2S2P20042 333 aaKnown RBP21.37■■□□□ 1.01
PHGDH-234ENST00000642041 RGMBQ6NW40 437 aa21.37■■□□□ 1.01
PHGDH-234ENST00000642041 VPS33BQ9H267 617 aa21.37■■□□□ 1.01
PHGDH-234ENST00000642041 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
PHGDH-234ENST00000642041 ALDH1L1O75891 902 aa21.36■■□□□ 1.01
PHGDH-234ENST00000642041 HOXA10P31260 410 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-234ENST00000642041 GMPSP49915 693 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-234ENST00000642041 HIRAP54198 1017 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-234ENST00000642041 KIF23Q02241 960 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-234ENST00000642041 CXCL9Q07325 125 aa21.36■■□□□ 1.01
PHGDH-234ENST00000642041 HABP4Q5JVS0 413 aaKnown RBP21.36■■□□□ 1.01
PHGDH-234ENST00000642041 CCDC102AQ96A19 550 aa21.36■■□□□ 1.01
PHGDH-234ENST00000642041 HPS5Q9UPZ3 1129 aa21.36■■□□□ 1.01
PHGDH-234ENST00000642041 CDHR2Q9BYE9 1310 aa21.35■■□□□ 1.01
PHGDH-234ENST00000642041 PPIP5K2O43314 1243 aa21.35■■□□□ 1.01
PHGDH-234ENST00000642041 GNAI2P04899 355 aa21.35■■□□□ 1.01
PHGDH-234ENST00000642041 AKAP11Q9UKA4 1901 aa21.35■■□□□ 1.01
PHGDH-234ENST00000642041 KSR2Q6VAB6 950 aa21.34■■□□□ 1.01
PHGDH-234ENST00000642041 ANKRD44Q8N8A2 993 aa21.34■■□□□ 1.01
PHGDH-234ENST00000642041 DNAAF4Q8WXU2 420 aa21.34■■□□□ 1.01
PHGDH-234ENST00000642041 SRCIN1Q9C0H9 1055 aa21.34■■□□□ 1.01
PHGDH-234ENST00000642041 ZNRF3Q9ULT6 936 aa21.34■■□□□ 1.01
PHGDH-234ENST00000642041 PRAMEF22A3QJZ6 481 aa21.33■■□□□ 1.01
PHGDH-234ENST00000642041 AOC3Q16853 763 aa21.33■■□□□ 1.01
PHGDH-234ENST00000642041 NECTIN2Q92692 538 aa21.33■■□□□ 1.01
PHGDH-234ENST00000642041 RPGRQ92834 1020 aaKnown RBP21.33■■□□□ 1.01
PHGDH-234ENST00000642041 NYXQ9GZU5 481 aa21.33■■□□□ 1.01
PHGDH-234ENST00000642041 CHPF2Q9P2E5 772 aa21.33■■□□□ 1.01
PHGDH-234ENST00000642041 PKN2Q16513 984 aaKnown RBP21.32■■□□□ 1
PHGDH-234ENST00000642041 SLC4A10Q6U841 1118 aa21.32■■□□□ 1
PHGDH-234ENST00000642041 USP48Q86UV5 1035 aa21.32■■□□□ 1
PHGDH-234ENST00000642041 CRAMP1Q96RY5 1269 aa21.32■■□□□ 1
PHGDH-234ENST00000642041 ABCC12Q96J65 1359 aa21.32■■□□□ 1
PHGDH-234ENST00000642041 NEXNQ0ZGT2 675 aa21.31■■□□□ 1
PHGDH-234ENST00000642041 TRPM4Q8TD43 1214 aa21.31■■□□□ 1
PHGDH-234ENST00000642041 RBM19Q9Y4C8 960 aaKnown RBP21.31■■□□□ 1
PHGDH-234ENST00000642041 PPEF1O14829 653 aaPredicted RBP21.3■■□□□ 1
PHGDH-234ENST00000642041 ZNF157P51786 506 aaPredicted RBP21.3■■□□□ 1
PHGDH-234ENST00000642041 HLFQ16534 295 aa21.3■■□□□ 1
PHGDH-234ENST00000642041 G2E3Q7L622 706 aa21.3■■□□□ 1
PHGDH-234ENST00000642041 C2orf69Q8N8R5 385 aa21.3■■□□□ 1
PHGDH-234ENST00000642041 RBM17Q96I25 401 aaKnown RBP21.3■■□□□ 1
PHGDH-234ENST00000642041 CSRNP1Q96S65 589 aa21.3■■□□□ 1
PHGDH-234ENST00000642041 DCTPP1Q9H773 170 aa21.3■■□□□ 1
PHGDH-234ENST00000642041 GBA2Q9HCG7 927 aaPredicted RBP21.3■■□□□ 1
PHGDH-234ENST00000642041 RIC1Q4ADV7 1423 aa21.29■■□□□ 1
PHGDH-234ENST00000642041 NUCB1Q02818 461 aa21.29■■□□□ 1
PHGDH-234ENST00000642041 SLC51AQ86UW1 340 aa21.29■■□□□ 1
PHGDH-234ENST00000642041 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
PHGDH-234ENST00000642041 BACH2Q9BYV9 841 aa21.29■■□□□ 1
PHGDH-234ENST00000642041 NBPF26B4DH59 902 aa21.28■■□□□ 1
PHGDH-234ENST00000642041 PDE4AP27815 886 aa21.28■■□□□ 1
PHGDH-234ENST00000642041 TNIP1Q15025 636 aa21.28■■□□□ 1
PHGDH-234ENST00000642041 NBPF10Q6P3W6 841 aaKnown RBP21.28■■□□□ 1
PHGDH-234ENST00000642041 CNOT7Q9UIV1 285 aaKnown RBP21.28■■□□□ 1
PHGDH-234ENST00000642041 MKI67P46013 3256 aaKnown RBP21.28■■□□□ 1
PHGDH-234ENST00000642041 UBTFL1P0CB47 393 aaPredicted RBP21.27■■□□□ 1
PHGDH-234ENST00000642041 HSP90AB4PQ58FF6 505 aa21.27■■□□□ 1
PHGDH-234ENST00000642041 DLK2Q6UY11 383 aa21.27■■□□□ 1
PHGDH-234ENST00000642041 REM2Q8IYK8 340 aaPredicted RBP21.27■■□□□ 1
PHGDH-234ENST00000642041 SUPT20HQ8NEM7 779 aa21.27■■□□□ 1
PHGDH-234ENST00000642041 LINS1Q8NG48 757 aa21.27■■□□□ 1
PHGDH-234ENST00000642041 RTFDC1Q9BY42 306 aaPredicted RBP21.27■■□□□ 1
PHGDH-234ENST00000642041 TMX4Q9H1E5 349 aaPredicted RBP21.27■■□□□ 1
PHGDH-234ENST00000642041 PI4KAP2A4QPH2 592 aa21.26■□□□□ 0.99
PHGDH-234ENST00000642041 H7C1D1 291 aa21.26■□□□□ 0.99
PHGDH-234ENST00000642041 SLC10A3P09131 477 aa21.26■□□□□ 0.99
PHGDH-234ENST00000642041 PI4KAP1Q8N8J0 262 aa21.26■□□□□ 0.99
PHGDH-234ENST00000642041 PDIA6Q15084 440 aa21.25■□□□□ 0.99
PHGDH-234ENST00000642041 CEP85Q6P2H3 762 aa21.25■□□□□ 0.99
PHGDH-234ENST00000642041 CHD1LQ86WJ1 897 aa21.25■□□□□ 0.99
PHGDH-234ENST00000642041 ATP6V0A2Q9Y487 856 aa21.25■□□□□ 0.99
PHGDH-234ENST00000642041 RAD17O75943 681 aa21.24■□□□□ 0.99
PHGDH-234ENST00000642041 MYL6BP14649 208 aa21.24■□□□□ 0.99
PHGDH-234ENST00000642041 ATP8B2P98198 1209 aa21.24■□□□□ 0.99
PHGDH-234ENST00000642041 PROSER3Q2NL68 480 aa21.24■□□□□ 0.99
PHGDH-234ENST00000642041 BEND3Q5T5X7 828 aa21.24■□□□□ 0.99
PHGDH-234ENST00000642041 KRT26Q7Z3Y9 468 aa21.24■□□□□ 0.99
PHGDH-234ENST00000642041 PHAXQ9H814 394 aaKnown RBP21.24■□□□□ 0.99
PHGDH-234ENST00000642041 POLR2AP24928 1970 aaKnown RBP21.23■□□□□ 0.99
PHGDH-234ENST00000642041 SHTN1A0MZ66 631 aa21.23■□□□□ 0.99
PHGDH-234ENST00000642041 F6X3S4 739 aa21.23■□□□□ 0.99
PHGDH-234ENST00000642041 RGS3P49796 1198 aa21.23■□□□□ 0.99
PHGDH-234ENST00000642041 RIC3Q7Z5B4 369 aa21.23■□□□□ 0.99
PHGDH-234ENST00000642041 HDAC9Q9UKV0 1011 aa21.23■□□□□ 0.99
PHGDH-234ENST00000642041 ANXA1P04083 346 aa21.22■□□□□ 0.99
PHGDH-234ENST00000642041 KIAA2012Q0VF49 1180 aa21.22■□□□□ 0.99
PHGDH-234ENST00000642041 ANKRD13DQ6ZTN6 518 aa21.22■□□□□ 0.99
PHGDH-234ENST00000642041 MICALL2Q8IY33 904 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms