RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
SRRM4-204ENST00000641899 FAM89AQ96GI7 184 aa19.61■□□□□ 0.73
SRRM4-204ENST00000641899 ANKIB1Q9P2G1 1089 aa19.61■□□□□ 0.73
SRRM4-204ENST00000641899 DBF4Q9UBU7 674 aaPredicted RBP19.61■□□□□ 0.73
SRRM4-204ENST00000641899 EGFRP00533 1210 aa19.6■□□□□ 0.73
SRRM4-204ENST00000641899 HOXB7P09629 217 aa19.6■□□□□ 0.73
SRRM4-204ENST00000641899 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
SRRM4-204ENST00000641899 GGA1Q9UJY5 639 aa19.6■□□□□ 0.73
SRRM4-204ENST00000641899 ANKRD36CQ5JPF3 1778 aa19.6■□□□□ 0.73
SRRM4-204ENST00000641899 IRS4O14654 1257 aaPredicted RBP19.59■□□□□ 0.73
SRRM4-204ENST00000641899 DLK2Q6UY11 383 aa19.59■□□□□ 0.73
SRRM4-204ENST00000641899 ISCA1Q9BUE6 129 aa19.59■□□□□ 0.73
SRRM4-204ENST00000641899 HYPKQ9NX55 129 aa19.59■□□□□ 0.73
SRRM4-204ENST00000641899 PODXL2Q9NZ53 605 aa19.59■□□□□ 0.73
SRRM4-204ENST00000641899 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
SRRM4-204ENST00000641899 UFL1O94874 794 aa19.58■□□□□ 0.72
SRRM4-204ENST00000641899 TMPOP42166 694 aaKnown RBP19.58■□□□□ 0.72
SRRM4-204ENST00000641899 SCARF1Q14162 830 aa19.58■□□□□ 0.72
SRRM4-204ENST00000641899 ANGEL2Q5VTE6 544 aaKnown RBP19.58■□□□□ 0.72
SRRM4-204ENST00000641899 RSBN1LQ6PCB5 846 aaPredicted RBP19.58■□□□□ 0.72
SRRM4-204ENST00000641899 RTL9Q8NET4 1388 aa19.57■□□□□ 0.72
SRRM4-204ENST00000641899 DUOX1Q9NRD9 1551 aa19.57■□□□□ 0.72
SRRM4-204ENST00000641899 PITPNM2Q9BZ72 1349 aa19.57■□□□□ 0.72
SRRM4-204ENST00000641899 NF2P35240 595 aa19.57■□□□□ 0.72
SRRM4-204ENST00000641899 ZNF280AP59817 542 aaPredicted RBP19.57■□□□□ 0.72
SRRM4-204ENST00000641899 TRIM28Q13263 835 aaKnown RBP19.57■□□□□ 0.72
SRRM4-204ENST00000641899 RASAL3Q86YV0 1011 aa19.57■□□□□ 0.72
SRRM4-204ENST00000641899 HPS5Q9UPZ3 1129 aa19.57■□□□□ 0.72
SRRM4-204ENST00000641899 LAS1LQ9Y4W2 734 aaKnown RBP19.57■□□□□ 0.72
SRRM4-204ENST00000641899 ATP5J2-PTCD1G3V325 749 aa19.56■□□□□ 0.72
SRRM4-204ENST00000641899 USP17L8P0C7I0 530 aa19.56■□□□□ 0.72
SRRM4-204ENST00000641899 CCDC152Q4G0S7 254 aa19.56■□□□□ 0.72
SRRM4-204ENST00000641899 GCC1Q96CN9 775 aa19.56■□□□□ 0.72
SRRM4-204ENST00000641899 KCNQ5Q9NR82 932 aa19.56■□□□□ 0.72
SRRM4-204ENST00000641899 DLG5Q8TDM6 1919 aa19.55■□□□□ 0.72
SRRM4-204ENST00000641899 CHL1O00533 1208 aa19.55■□□□□ 0.72
SRRM4-204ENST00000641899 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
SRRM4-204ENST00000641899 ZBTB38Q8NAP3 1195 aaPredicted RBP19.55■□□□□ 0.72
SRRM4-204ENST00000641899 LRRC37AA6NMS7 1700 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 ZNF609O15014 1411 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 SREBF2Q12772 1141 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 TTLL12Q14166 644 aaPredicted RBP19.54■□□□□ 0.72
SRRM4-204ENST00000641899 RTL5Q5HYW3 569 aaPredicted RBP19.54■□□□□ 0.72
SRRM4-204ENST00000641899 RIC3Q7Z5B4 369 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 PODNQ7Z5L7 613 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 OGFOD1Q8N543 542 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 CHMP4AQ9BY43 222 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 MYOZ2Q9NPC6 264 aa19.54■□□□□ 0.72
SRRM4-204ENST00000641899 MMP14P50281 582 aa19.53■□□□□ 0.72
SRRM4-204ENST00000641899 NOM1Q5C9Z4 860 aaKnown RBP19.53■□□□□ 0.72
SRRM4-204ENST00000641899 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
SRRM4-204ENST00000641899 USP17L3A6NCW0 530 aa19.52■□□□□ 0.72
SRRM4-204ENST00000641899 USP17L4A6NCW7 530 aa19.52■□□□□ 0.72
SRRM4-204ENST00000641899 ATP2B4P23634 1241 aa19.52■□□□□ 0.72
SRRM4-204ENST00000641899 NEUROD2Q15784 382 aa19.52■□□□□ 0.72
SRRM4-204ENST00000641899 USP17L1Q7RTZ2 530 aa19.52■□□□□ 0.72
SRRM4-204ENST00000641899 LAMB2P55268 1798 aa19.52■□□□□ 0.71
SRRM4-204ENST00000641899 XDHP47989 1333 aa19.51■□□□□ 0.71
SRRM4-204ENST00000641899 RALBP1Q15311 655 aa19.51■□□□□ 0.71
SRRM4-204ENST00000641899 FBXO46Q6PJ61 603 aaPredicted RBP19.51■□□□□ 0.71
SRRM4-204ENST00000641899 ANKRD18AQ8IVF6 992 aa19.51■□□□□ 0.71
SRRM4-204ENST00000641899 ZNF296Q8WUU4 475 aaPredicted RBP19.51■□□□□ 0.71
SRRM4-204ENST00000641899 DDX60Q8IY21 1712 aaKnown RBP19.51■□□□□ 0.71
SRRM4-204ENST00000641899 ASTN2O75129 1339 aaPredicted RBP19.5■□□□□ 0.71
SRRM4-204ENST00000641899 MYO3BQ8WXR4 1341 aa19.5■□□□□ 0.71
SRRM4-204ENST00000641899 PDE4DIPQ5VU43 2346 aa19.5■□□□□ 0.71
SRRM4-204ENST00000641899 GPR25O00155 361 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 PDE8AO60658 829 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 TBC1D8O95759 1140 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 TM4SF4P48230 202 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 KRT24Q2M2I5 525 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 ARMC9Q7Z3E5 817 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 CCDC191Q8NCU4 936 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 CDC5LQ99459 802 aaKnown RBP19.49■□□□□ 0.71
SRRM4-204ENST00000641899 PAPPA2Q9BXP8 1791 aa19.49■□□□□ 0.71
SRRM4-204ENST00000641899 UBE2Q2LH0YL09 131 aa19.48■□□□□ 0.71
SRRM4-204ENST00000641899 ALDH1A1P00352 501 aa19.48■□□□□ 0.71
SRRM4-204ENST00000641899 SEC31BQ9NQW1 1179 aa19.48■□□□□ 0.71
SRRM4-204ENST00000641899 FKTNO75072 461 aa19.47■□□□□ 0.71
SRRM4-204ENST00000641899 DDX58O95786 925 aaKnown RBP19.47■□□□□ 0.71
SRRM4-204ENST00000641899 PCCAP05165 728 aaPredicted RBP19.47■□□□□ 0.71
SRRM4-204ENST00000641899 WDR43Q15061 677 aaKnown RBP eCLIP19.47■□□□□ 0.71
SRRM4-204ENST00000641899 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
SRRM4-204ENST00000641899 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
SRRM4-204ENST00000641899 GMLQ99445 158 aa19.47■□□□□ 0.71
SRRM4-204ENST00000641899 CWC25Q9NXE8 425 aaPredicted RBP19.47■□□□□ 0.71
SRRM4-204ENST00000641899 AKAP11Q9UKA4 1901 aa19.47■□□□□ 0.71
SRRM4-204ENST00000641899 INHBEP58166 350 aa19.45■□□□□ 0.7
SRRM4-204ENST00000641899 CALD1Q05682 793 aaKnown RBP19.45■□□□□ 0.7
SRRM4-204ENST00000641899 APOBEC3FQ8IUX4 373 aaKnown RBP19.45■□□□□ 0.7
SRRM4-204ENST00000641899 MYD88Q99836 296 aa19.45■□□□□ 0.7
SRRM4-204ENST00000641899 CFHR5Q9BXR6 569 aa19.45■□□□□ 0.7
SRRM4-204ENST00000641899 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
SRRM4-204ENST00000641899 FBXW7Q969H0 707 aa19.44■□□□□ 0.7
SRRM4-204ENST00000641899 TNRC18O15417 2968 aaPredicted RBP19.43■□□□□ 0.7
SRRM4-204ENST00000641899 STRIP1Q5VSL9 837 aa19.43■□□□□ 0.7
SRRM4-204ENST00000641899 MOB2Q70IA6 237 aa19.43■□□□□ 0.7
SRRM4-204ENST00000641899 CCDC146Q8IYE0 955 aa19.43■□□□□ 0.7
SRRM4-204ENST00000641899 COA1Q9GZY4 146 aa19.43■□□□□ 0.7
SRRM4-204ENST00000641899 MED23Q9ULK4 1368 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms