RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 MPHOSPH8Q99549 860 aa19.83■□□□□ 0.77
PHGDH-216ENST00000641375 BCL2L12Q9HB09 334 aa19.83■□□□□ 0.77
PHGDH-216ENST00000641375 PAG1Q9NWQ8 432 aa19.83■□□□□ 0.77
PHGDH-216ENST00000641375 COL24A1Q17RW2 1714 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 PDE8BO95263 885 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 NBR1Q14596 966 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 SLC27A3Q5K4L6 730 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 TTC39AQ5SRH9 613 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 TBC1D9BQ66K14 1250 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 VGLL2Q8N8G2 317 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 ARHGEF1Q92888 912 aaKnown RBP19.83■□□□□ 0.76
PHGDH-216ENST00000641375 EDC3Q96F86 508 aaKnown RBP19.83■□□□□ 0.76
PHGDH-216ENST00000641375 FAM227BQ96M60 508 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 SETDB2Q96T68 719 aa19.83■□□□□ 0.76
PHGDH-216ENST00000641375 C4AP0C0L4 1744 aa19.82■□□□□ 0.76
PHGDH-216ENST00000641375 TRAPPC3LQ5T215 181 aa19.82■□□□□ 0.76
PHGDH-216ENST00000641375 PALD1Q9ULE6 856 aa19.82■□□□□ 0.76
PHGDH-216ENST00000641375 EP400Q96L91 3159 aa19.82■□□□□ 0.76
PHGDH-216ENST00000641375 HSP90AA1P07900 732 aaKnown RBP19.81■□□□□ 0.76
PHGDH-216ENST00000641375 ADRA2BP18089 450 aa19.81■□□□□ 0.76
PHGDH-216ENST00000641375 IGHMBP2P38935 993 aaKnown RBP19.81■□□□□ 0.76
PHGDH-216ENST00000641375 SPRYD3Q8NCJ5 442 aa19.81■□□□□ 0.76
PHGDH-216ENST00000641375 CCDC171Q6TFL3 1326 aa19.81■□□□□ 0.76
PHGDH-216ENST00000641375 A0A0D9SFI3 127 aa19.81■□□□□ 0.76
PHGDH-216ENST00000641375 GTF2E1P29083 439 aaPredicted RBP19.81■□□□□ 0.76
PHGDH-216ENST00000641375 RFC4P35249 363 aa19.81■□□□□ 0.76
PHGDH-216ENST00000641375 BICDL1Q6ZP65 573 aa19.81■□□□□ 0.76
PHGDH-216ENST00000641375 DDX46Q7L014 1031 aaKnown RBP19.81■□□□□ 0.76
PHGDH-216ENST00000641375 CASZ1Q86V15 1759 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 MED23Q9ULK4 1368 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 GOLIM4O00461 696 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 MCM2P49736 904 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 NEK4P51957 841 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 ERFEQ4G0M1 354 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 LRRC4BQ9NT99 713 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 SRP68Q9UHB9 627 aaKnown RBP19.8■□□□□ 0.76
PHGDH-216ENST00000641375 NDUFB9Q9Y6M9 179 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 ADORA1P30542 326 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 SF3B3Q15393 1217 aaKnown RBP19.8■□□□□ 0.76
PHGDH-216ENST00000641375 PUM3Q15397 648 aaKnown RBP19.8■□□□□ 0.76
PHGDH-216ENST00000641375 SLC10A5Q5PT55 438 aa19.8■□□□□ 0.76
PHGDH-216ENST00000641375 CDC5LQ99459 802 aaKnown RBP19.8■□□□□ 0.76
PHGDH-216ENST00000641375 LRRFIP1Q32MZ4 808 aaKnown RBP19.79■□□□□ 0.76
PHGDH-216ENST00000641375 SMIM5Q71RC9 77 aa19.79■□□□□ 0.76
PHGDH-216ENST00000641375 ZNF512BQ96KM6 892 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-216ENST00000641375 SEC31BQ9NQW1 1179 aa19.79■□□□□ 0.76
PHGDH-216ENST00000641375 ARAP2Q8WZ64 1704 aa19.79■□□□□ 0.76
PHGDH-216ENST00000641375 TRIM37O94972 964 aa19.78■□□□□ 0.76
PHGDH-216ENST00000641375 PTH1RQ03431 593 aa19.78■□□□□ 0.76
PHGDH-216ENST00000641375 LPIN2Q92539 896 aa19.78■□□□□ 0.76
PHGDH-216ENST00000641375 MAP4K1Q92918 833 aa19.78■□□□□ 0.76
PHGDH-216ENST00000641375 CHMP5Q9NZZ3 219 aa19.78■□□□□ 0.76
PHGDH-216ENST00000641375 UBR3Q6ZT12 1888 aa19.78■□□□□ 0.76
PHGDH-216ENST00000641375 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
PHGDH-216ENST00000641375 NBPF5PQ86XG9 351 aaPredicted RBP19.78■□□□□ 0.76
PHGDH-216ENST00000641375 SNX14Q9Y5W7 946 aa19.77■□□□□ 0.76
PHGDH-216ENST00000641375 MCMDC2Q4G0Z9 681 aa19.77■□□□□ 0.75
PHGDH-216ENST00000641375 AMIGO3Q86WK7 504 aa19.77■□□□□ 0.75
PHGDH-216ENST00000641375 PHF14O94880 888 aa19.76■□□□□ 0.75
PHGDH-216ENST00000641375 KCNJ4P48050 445 aa19.76■□□□□ 0.75
PHGDH-216ENST00000641375 FKBP4Q02790 459 aaKnown RBP eCLIP19.76■□□□□ 0.75
PHGDH-216ENST00000641375 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
PHGDH-216ENST00000641375 KCNB2Q92953 911 aa19.76■□□□□ 0.75
PHGDH-216ENST00000641375 HELLSQ9NRZ9 838 aa19.76■□□□□ 0.75
PHGDH-216ENST00000641375 SLC5A1P13866 664 aa19.76■□□□□ 0.75
PHGDH-216ENST00000641375 ZKSCAN1P17029 563 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-216ENST00000641375 FGFR2P21802 821 aa19.76■□□□□ 0.75
PHGDH-216ENST00000641375 CIZ1Q9ULV3 898 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-216ENST00000641375 RNF20Q5VTR2 975 aa19.75■□□□□ 0.75
PHGDH-216ENST00000641375 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
PHGDH-216ENST00000641375 RBM8AQ9Y5S9 174 aaKnown RBP19.75■□□□□ 0.75
PHGDH-216ENST00000641375 AKAP11Q9UKA4 1901 aa19.75■□□□□ 0.75
PHGDH-216ENST00000641375 DDIT3P35638 169 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 NFKBIBQ15653 356 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 ZNF589Q86UQ0 364 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-216ENST00000641375 ANKRD18AQ8IVF6 992 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 TAF5LO75529 589 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 UQCRFS1P1P0C7P4 283 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 SSFA2P28290 1259 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 PRPF40BQ6NWY9 871 aaKnown RBP19.74■□□□□ 0.75
PHGDH-216ENST00000641375 RASEFQ8IZ41 740 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 CARMIL3Q8ND23 1372 aa19.74■□□□□ 0.75
PHGDH-216ENST00000641375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 ZFYP08048 801 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 MYH7P12883 1935 aa19.73■□□□□ 0.75
PHGDH-216ENST00000641375 HELBQ8NG08 1087 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 RNF113AO15541 343 aaKnown RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 ARID4AP29374 1257 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 TTF1Q15361 905 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 ZMYM1Q5SVZ6 1142 aa19.73■□□□□ 0.75
PHGDH-216ENST00000641375 CCDC102BQ68D86 513 aa19.73■□□□□ 0.75
PHGDH-216ENST00000641375 UPF3BQ9BZI7 483 aaKnown RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 BSDC1Q9NW68 430 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-216ENST00000641375 HMG20BQ9P0W2 317 aa19.73■□□□□ 0.75
PHGDH-216ENST00000641375 CREB3L3Q68CJ9 461 aa19.72■□□□□ 0.75
PHGDH-216ENST00000641375 TM6SF1Q9BZW5 370 aa19.72■□□□□ 0.75
PHGDH-216ENST00000641375 NPHP1O15259 732 aa19.71■□□□□ 0.75
PHGDH-216ENST00000641375 RXRBP28702 533 aa19.71■□□□□ 0.75
PHGDH-216ENST00000641375 MCAMP43121 646 aa19.71■□□□□ 0.75
PHGDH-216ENST00000641375 ZAP70P43403 619 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms