RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 NOM1Q5C9Z4 860 aaKnown RBP12.85□□□□□ -0.35
PHGDH-212ENST00000641247 PNISRQ8TF01 805 aaKnown RBP12.85□□□□□ -0.35
PHGDH-212ENST00000641247 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
PHGDH-212ENST00000641247 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 POLR2AP24928 1970 aaKnown RBP12.84□□□□□ -0.35
PHGDH-212ENST00000641247 FKTNO75072 461 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 EN2P19622 333 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-212ENST00000641247 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 FKBP1BP68106 108 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 CAP1Q01518 475 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 XAGE3Q8WTP9 111 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 GMLQ99445 158 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 COLQQ9Y215 455 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-212ENST00000641247 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
PHGDH-212ENST00000641247 TAF1P21675 1872 aa12.83□□□□□ -0.36
PHGDH-212ENST00000641247 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-212ENST00000641247 SF3B3Q15393 1217 aaKnown RBP12.83□□□□□ -0.36
PHGDH-212ENST00000641247 TMC4Q7Z404 712 aa12.83□□□□□ -0.36
PHGDH-212ENST00000641247 FAM89AQ96GI7 184 aa12.83□□□□□ -0.36
PHGDH-212ENST00000641247 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
PHGDH-212ENST00000641247 CFHR5Q9BXR6 569 aa12.83□□□□□ -0.36
PHGDH-212ENST00000641247 WTIPA6NIX2 430 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-212ENST00000641247 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
PHGDH-212ENST00000641247 NBPF9Q3BBW0 867 aa12.82□□□□□ -0.36
PHGDH-212ENST00000641247 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-212ENST00000641247 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
PHGDH-212ENST00000641247 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
PHGDH-212ENST00000641247 KDM3BQ7LBC6 1761 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 OTOP1Q7RTM1 612 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 EYA3Q99504 573 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 MXD3Q9BW11 206 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 ZC3H12CQ9C0D7 883 aaKnown RBP12.81□□□□□ -0.36
PHGDH-212ENST00000641247 SEC31BQ9NQW1 1179 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 TRIM17Q9Y577 477 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 AKAP11Q9UKA4 1901 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 LAMB2P55268 1798 aa12.81□□□□□ -0.36
PHGDH-212ENST00000641247 PRKG1Q13976 671 aa12.8□□□□□ -0.36
PHGDH-212ENST00000641247 HSP90AB3PQ58FF7 597 aa12.8□□□□□ -0.36
PHGDH-212ENST00000641247 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-212ENST00000641247 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
PHGDH-212ENST00000641247 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 ATP5J2-PTCD1G3V325 749 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
PHGDH-212ENST00000641247 KRT24Q2M2I5 525 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 ISCA1Q9BUE6 129 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 PODXL2Q9NZ53 605 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 TSPYL4Q9UJ04 414 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 SCN9AQ15858 1988 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 PITPNM2Q9BZ72 1349 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 ANKRD36CQ5JPF3 1778 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 PAPPA2Q9BXP8 1791 aa12.79□□□□□ -0.36
PHGDH-212ENST00000641247 MKI67P46013 3256 aaKnown RBP12.78□□□□□ -0.36
PHGDH-212ENST00000641247 TTLL12Q14166 644 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-212ENST00000641247 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
PHGDH-212ENST00000641247 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
PHGDH-212ENST00000641247 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
PHGDH-212ENST00000641247 IGF2BP3O00425 579 aaKnown RBP eCLIP12.77□□□□□ -0.37
PHGDH-212ENST00000641247 WNT10BO00744 389 aa12.77□□□□□ -0.37
PHGDH-212ENST00000641247 UFL1O94874 794 aa12.77□□□□□ -0.37
PHGDH-212ENST00000641247 LDLRAD1Q5T700 205 aa12.77□□□□□ -0.37
PHGDH-212ENST00000641247 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.37
PHGDH-212ENST00000641247 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
PHGDH-212ENST00000641247 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-212ENST00000641247 SREBF2Q12772 1141 aa12.76□□□□□ -0.37
PHGDH-212ENST00000641247 IFNL1Q8IU54 200 aa12.76□□□□□ -0.37
PHGDH-212ENST00000641247 ZNF609O15014 1411 aa12.76□□□□□ -0.37
PHGDH-212ENST00000641247 G3V3G9 751 aa12.75□□□□□ -0.37
PHGDH-212ENST00000641247 IRS4O14654 1257 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-212ENST00000641247 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
PHGDH-212ENST00000641247 CD99L2Q8TCZ2 262 aa12.75□□□□□ -0.37
PHGDH-212ENST00000641247 ARMC5Q96C12 935 aa12.75□□□□□ -0.37
PHGDH-212ENST00000641247 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-212ENST00000641247 ANKIB1Q9P2G1 1089 aa12.75□□□□□ -0.37
PHGDH-212ENST00000641247 GGA1Q9UJY5 639 aa12.75□□□□□ -0.37
PHGDH-212ENST00000641247 USP17L3A6NCW0 530 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 USP17L4A6NCW7 530 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 DLL1O00548 723 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 SASH1O94885 1247 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 USP17L1Q7RTZ2 530 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 PLBD2Q8NHP8 589 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-212ENST00000641247 CLMNQ96JQ2 1002 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 CCDC85AQ96PX6 553 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-212ENST00000641247 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
PHGDH-212ENST00000641247 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
PHGDH-212ENST00000641247 H0YGN5 161 aa12.73□□□□□ -0.37
PHGDH-212ENST00000641247 DACT2Q5SW24 774 aa12.73□□□□□ -0.37
PHGDH-212ENST00000641247 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
PHGDH-212ENST00000641247 PTPN18Q99952 460 aa12.73□□□□□ -0.37
PHGDH-212ENST00000641247 ANGEL1Q9UNK9 670 aaKnown RBP12.73□□□□□ -0.37
PHGDH-212ENST00000641247 HTTP42858 3142 aa12.72□□□□□ -0.37
PHGDH-212ENST00000641247 SZT2Q5T011 3432 aa12.72□□□□□ -0.37
PHGDH-212ENST00000641247 ALDH1A1P00352 501 aa12.72□□□□□ -0.37
PHGDH-212ENST00000641247 GJA5P36382 358 aa12.72□□□□□ -0.37
PHGDH-212ENST00000641247 ZBED3Q96IU2 234 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 960.7 ms