RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 SMC3Q9UQE7 1217 aa18.08■□□□□ 0.48
PAX6-277ENST00000640735 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
PAX6-277ENST00000640735 ANKRD13DQ6ZTN6 518 aa18.07■□□□□ 0.48
PAX6-277ENST00000640735 RBM8AQ9Y5S9 174 aaKnown RBP18.07■□□□□ 0.48
PAX6-277ENST00000640735 GADD45BO75293 160 aaPredicted RBP18.07■□□□□ 0.48
PAX6-277ENST00000640735 ZKSCAN1P17029 563 aaPredicted RBP18.07■□□□□ 0.48
PAX6-277ENST00000640735 TMED8Q6PL24 325 aaPredicted RBP18.07■□□□□ 0.48
PAX6-277ENST00000640735 MYD88Q99836 296 aa18.07■□□□□ 0.48
PAX6-277ENST00000640735 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
PAX6-277ENST00000640735 TOGARAM1Q9Y4F4 1720 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 SEMA3EO15041 775 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 PHF14O94880 888 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 LARGE1O95461 756 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 F13A1P00488 732 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 TSGA10IPQ3SY00 556 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 FAM227BQ96M60 508 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 TLR7Q9NYK1 1049 aaKnown RBP18.06■□□□□ 0.48
PAX6-277ENST00000640735 DOT1LQ8TEK3 1739 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 RFX7Q2KHR2 1363 aa18.06■□□□□ 0.48
PAX6-277ENST00000640735 MYL6BP14649 208 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 ATP6V1DQ9Y5K8 247 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 USP16Q9Y5T5 823 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 LAMB4A4D0S4 1761 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 SLC27A2O14975 620 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 CPA1P15085 419 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 PSMA5P28066 241 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 ST3GAL1Q11201 340 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 TSPY26PQ9H489 355 aa18.05■□□□□ 0.48
PAX6-277ENST00000640735 ATP5JP18859 108 aa18.04■□□□□ 0.48
PAX6-277ENST00000640735 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
PAX6-277ENST00000640735 NOL7Q9UMY1 257 aaKnown RBP18.03■□□□□ 0.48
PAX6-277ENST00000640735 MTMR6Q9Y217 621 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 AFDNP55196 1824 aaKnown RBP18.03■□□□□ 0.48
PAX6-277ENST00000640735 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
PAX6-277ENST00000640735 CASP7P55210 303 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 UBE2HP62256 183 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
PAX6-277ENST00000640735 FAM196AQ6ZSG2 479 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 BOLA2Q9H3K6 86 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 BCL9O00512 1426 aa18.03■□□□□ 0.48
PAX6-277ENST00000640735 LETM1O95202 739 aaPredicted RBP18.02■□□□□ 0.48
PAX6-277ENST00000640735 GJB2P29033 226 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 ME3Q16798 604 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 CC2D2BQ6DHV5 1058 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 AK7Q96M32 723 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 GDPD2Q9HCC8 539 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 HMG20BQ9P0W2 317 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 CNPY2Q9Y2B0 182 aa18.02■□□□□ 0.48
PAX6-277ENST00000640735 UVSSAQ2YD98 709 aa18.02■□□□□ 0.47
PAX6-277ENST00000640735 CCDC183Q5T5S1 534 aa18.02■□□□□ 0.47
PAX6-277ENST00000640735 RNF20Q5VTR2 975 aa18.02■□□□□ 0.47
PAX6-277ENST00000640735 PLBD2Q8NHP8 589 aa18.02■□□□□ 0.47
PAX6-277ENST00000640735 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.47
PAX6-277ENST00000640735 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.47
PAX6-277ENST00000640735 FSD1Q9BTV5 496 aa18.02■□□□□ 0.47
PAX6-277ENST00000640735 SIL1Q9H173 461 aa18.02■□□□□ 0.47
PAX6-277ENST00000640735 ANKRD1Q15327 319 aa18.01■□□□□ 0.47
PAX6-277ENST00000640735 TNNI3KQ59H18 835 aa18.01■□□□□ 0.47
PAX6-277ENST00000640735 KLHDC4Q8TBB5 520 aa18.01■□□□□ 0.47
PAX6-277ENST00000640735 FPGT-TNNI3KV9GXZ4 949 aa18.01■□□□□ 0.47
PAX6-277ENST00000640735 SBF2Q86WG5 1849 aa18.01■□□□□ 0.47
PAX6-277ENST00000640735 NHSQ6T4R5 1651 aa18.01■□□□□ 0.47
PAX6-277ENST00000640735 MCM5P33992 734 aa18■□□□□ 0.47
PAX6-277ENST00000640735 CSPP1Q1MSJ5 1256 aa18■□□□□ 0.47
PAX6-277ENST00000640735 FAM184AQ8NB25 1140 aa18■□□□□ 0.47
PAX6-277ENST00000640735 DBNLQ9UJU6 430 aaKnown RBP18■□□□□ 0.47
PAX6-277ENST00000640735 TPCN1Q9ULQ1 816 aa18■□□□□ 0.47
PAX6-277ENST00000640735 ITGB4P16144 1822 aa18■□□□□ 0.47
PAX6-277ENST00000640735 TAF5LO75529 589 aa18■□□□□ 0.47
PAX6-277ENST00000640735 PLCD3Q8N3E9 789 aa18■□□□□ 0.47
PAX6-277ENST00000640735 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
PAX6-277ENST00000640735 NAP1L5Q96NT1 182 aaPredicted RBP18■□□□□ 0.47
PAX6-277ENST00000640735 ERVV-2B6SEH9 535 aa17.99■□□□□ 0.47
PAX6-277ENST00000640735 ZNF500O60304 480 aaPredicted RBP17.99■□□□□ 0.47
PAX6-277ENST00000640735 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
PAX6-277ENST00000640735 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.99■□□□□ 0.47
PAX6-277ENST00000640735 KCNJ4P48050 445 aa17.99■□□□□ 0.47
PAX6-277ENST00000640735 CABP4P57796 275 aa17.99■□□□□ 0.47
PAX6-277ENST00000640735 FOXD4L6Q3SYB3 417 aaPredicted RBP17.99■□□□□ 0.47
PAX6-277ENST00000640735 FOXD4L3Q6VB84 417 aaPredicted RBP17.99■□□□□ 0.47
PAX6-277ENST00000640735 H7C1W4 665 aa17.98■□□□□ 0.47
PAX6-277ENST00000640735 OFD1O75665 1012 aa17.98■□□□□ 0.47
PAX6-277ENST00000640735 MSNP26038 577 aaKnown RBP17.98■□□□□ 0.47
PAX6-277ENST00000640735 TFCP2Q12800 502 aa17.98■□□□□ 0.47
PAX6-277ENST00000640735 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
PAX6-277ENST00000640735 UBR2Q8IWV8 1755 aa17.98■□□□□ 0.47
PAX6-277ENST00000640735 TESPA1A2RU30 521 aaPredicted RBP17.97■□□□□ 0.47
PAX6-277ENST00000640735 KCNQ2O43526 872 aa17.97■□□□□ 0.47
PAX6-277ENST00000640735 UBE3BQ7Z3V4 1068 aa17.97■□□□□ 0.47
PAX6-277ENST00000640735 CCDC97Q96F63 343 aaPredicted RBP17.97■□□□□ 0.47
PAX6-277ENST00000640735 TMOD3Q9NYL9 352 aa17.97■□□□□ 0.47
PAX6-277ENST00000640735 KRT32Q14532 448 aa17.97■□□□□ 0.47
PAX6-277ENST00000640735 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
PAX6-277ENST00000640735 HAUS7Q99871 368 aa17.97■□□□□ 0.47
PAX6-277ENST00000640735 CCDC39Q9UFE4 941 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms