RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CEP128Q6ZU80 1094 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 SDSP20132 328 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 DRP2Q13474 957 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 SETDB1Q15047 1291 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 TBC1D22AQ8WUA7 517 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 BOLA2Q9H3K6 86 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 THEGQ9P2T0 379 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 GOLGA8KD6RF30 607 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 EVCP57679 992 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 SUGP1Q8IWZ8 645 aaKnown RBP9.42□□□□□ -0.9
NECAP1-227ENST00000640648 CCDC170Q8IYT3 715 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 USHBP1Q8N6Y0 703 aa9.42□□□□□ -0.9
NECAP1-227ENST00000640648 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 NDUFAB1O14561 156 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 USO1O60763 962 aaKnown RBP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 GNG11P61952 73 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 MEIS3Q99687 375 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 ZNF608Q9ULD9 1512 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 RAB11FIP3O75154 756 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 SCLT1Q96NL6 688 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 ASXL1Q8IXJ9 1541 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 GNAT3A8MTJ3 354 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 FKBP4Q02790 459 aaKnown RBP eCLIP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 TAF7Q15545 349 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 SKIDA1Q1XH10 827 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 CCDC129Q6ZRS4 1044 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 RABGGTAQ92696 567 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 BTBD11A6QL63 1104 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 GLRX3O76003 335 aaKnown RBP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 PEX19P40855 299 aa9.41□□□□□ -0.9
NECAP1-227ENST00000640648 MAGEC2Q9UBF1 373 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-227ENST00000640648 CTAGE9A4FU28 777 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-227ENST00000640648 HSP90AB2PQ58FF8 381 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 HSP90AA5PQ58FG0 334 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 FBXO31Q5XUX0 539 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-227ENST00000640648 ANKRD7Q92527 254 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 TMX3Q96JJ7 454 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 C14orf93Q9H972 538 aaKnown RBP9.4□□□□□ -0.9
NECAP1-227ENST00000640648 CTNNA3Q9UI47 895 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-227ENST00000640648 MPHOSPH6Q99547 160 aaKnown RBP9.4□□□□□ -0.9
NECAP1-227ENST00000640648 CCDC8Q9H0W5 538 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-227ENST00000640648 ZSCAN16Q9H4T2 348 aaPredicted RBP9.4□□□□□ -0.9
NECAP1-227ENST00000640648 STIM2Q9P246 746 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 MMP14P50281 582 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 CFAP100Q494V2 611 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 ZMYM4Q5VZL5 1548 aa9.4□□□□□ -0.9
NECAP1-227ENST00000640648 FAM135AQ9P2D6 1515 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 G3V3G9 751 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 GUCY1B3Q02153 619 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 FLIIQ13045 1269 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 CCDC6Q16204 474 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 DCAF8Q5TAQ9 597 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 SYT10Q6XYQ8 523 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 CCDC12Q8WUD4 166 aaPredicted RBP9.4□□□□□ -0.91
NECAP1-227ENST00000640648 LIMCH1Q9UPQ0 1083 aa9.4□□□□□ -0.91
NECAP1-227ENST00000640648 NBPF10Q6P3W6 841 aaKnown RBP9.39□□□□□ -0.91
NECAP1-227ENST00000640648 CLEC17AQ6ZS10 378 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
NECAP1-227ENST00000640648 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
NECAP1-227ENST00000640648 SEPT2Q15019 361 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 SRLQ86TD4 932 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 TAF4BQ92750 862 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 MOV10L1Q9BXT6 1211 aaKnown RBP9.39□□□□□ -0.91
NECAP1-227ENST00000640648 FLOT1O75955 427 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 STIM1Q13586 685 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 ELF2Q15723 593 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 CCAR1Q8IX12 1150 aaKnown RBP9.39□□□□□ -0.91
NECAP1-227ENST00000640648 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 ALS2CR12Q96Q35 445 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 PTPRCP08575 1304 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 CCDC151A5D8V7 595 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 PPP2R3AQ06190 1150 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 TTC39AQ5SRH9 613 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 N4BP2L2Q92802 583 aaPredicted RBP9.39□□□□□ -0.91
NECAP1-227ENST00000640648 TMX1Q9H3N1 280 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
NECAP1-227ENST00000640648 GOLGA6CA6NDK9 693 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 PPFIA2O75334 1257 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 ZRANB2O95218 330 aaKnown RBP eCLIP9.38□□□□□ -0.91
NECAP1-227ENST00000640648 GOLGA6DP0CG33 693 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 CFAP58Q5T655 872 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 CERS3Q8IU89 383 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 KIAA1524Q8TCG1 905 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 MICAL1Q8TDZ2 1067 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 UIMC1Q96RL1 719 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 HOMER3Q9NSC5 361 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 GOLGA6AQ9NYA3 693 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 SAMD15Q9P1V8 674 aa9.38□□□□□ -0.91
NECAP1-227ENST00000640648 TBC1D2BQ9UPU7 963 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms