RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
PNKP-231ENST00000640501 ZNF512BQ96KM6 892 aaPredicted RBP9.94□□□□□ -0.82
PNKP-231ENST00000640501 JAKMIP1Q96N16 626 aaKnown RBP9.94□□□□□ -0.82
PNKP-231ENST00000640501 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
PNKP-231ENST00000640501 ALDH8A1Q9H2A2 487 aaPredicted RBP9.94□□□□□ -0.82
PNKP-231ENST00000640501 ZSWIM6Q9HCJ5 1215 aa9.94□□□□□ -0.82
PNKP-231ENST00000640501 TBC1D2BQ9UPU7 963 aa9.94□□□□□ -0.82
PNKP-231ENST00000640501 BCORQ6W2J9 1755 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 RTL9Q8NET4 1388 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 GOLIM4O00461 696 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 NCLP19338 710 aaKnown RBP9.93□□□□□ -0.82
PNKP-231ENST00000640501 PDCP20941 246 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 IGHMBP2P38935 993 aaKnown RBP9.93□□□□□ -0.82
PNKP-231ENST00000640501 HLFQ16534 295 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
PNKP-231ENST00000640501 CSPP1Q1MSJ5 1256 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 FAM227BQ96M60 508 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 SLC4A9Q96Q91 983 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 MPHOSPH8Q99549 860 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 DSCC1Q9BVC3 393 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 CTNNA3Q9UI47 895 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 USP21Q9UK80 565 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 NHSQ6T4R5 1651 aa9.93□□□□□ -0.82
PNKP-231ENST00000640501 CNTNAP4Q9C0A0 1308 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 A0A0D9SFI3 127 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 SLC27A2O14975 620 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 RNF113AO15541 343 aaKnown RBP9.92□□□□□ -0.82
PNKP-231ENST00000640501 SLC5A1P13866 664 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 TIMM10P62072 90 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 PUM3Q15397 648 aaKnown RBP9.92□□□□□ -0.82
PNKP-231ENST00000640501 LRRC24Q50LG9 513 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 RC3H1Q5TC82 1133 aaKnown RBP9.92□□□□□ -0.82
PNKP-231ENST00000640501 USPL1Q5W0Q7 1092 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 INTS5Q6P9B9 1019 aaKnown RBP9.92□□□□□ -0.82
PNKP-231ENST00000640501 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
PNKP-231ENST00000640501 XAGE2Q96GT9 111 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 ZNF594Q96JF6 807 aaPredicted RBP9.92□□□□□ -0.82
PNKP-231ENST00000640501 CDC5LQ99459 802 aaKnown RBP9.92□□□□□ -0.82
PNKP-231ENST00000640501 NYXQ9GZU5 481 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 SMC3Q9UQE7 1217 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 KIF3AQ9Y496 699 aa9.92□□□□□ -0.82
PNKP-231ENST00000640501 BCL9LQ86UU0 1499 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 ARAP2Q8WZ64 1704 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 THSD7AQ9UPZ6 1657 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 TAF5LO75529 589 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 PDE8BO95263 885 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 BAG4O95429 457 aaKnown RBP9.91□□□□□ -0.82
PNKP-231ENST00000640501 AK2P54819 239 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 FGD1P98174 961 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 PTH1RQ03431 593 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 LPIN2Q92539 896 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 TTC14Q96N46 770 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 GREM2Q9H772 168 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 NIP7Q9Y221 180 aaKnown RBP eCLIP9.91□□□□□ -0.82
PNKP-231ENST00000640501 RIPOR2Q9Y4F9 1068 aa9.91□□□□□ -0.82
PNKP-231ENST00000640501 RPAP1Q9BWH6 1393 aaPredicted RBP9.9□□□□□ -0.82
PNKP-231ENST00000640501 MYH7P12883 1935 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 LRP5O75197 1615 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 GOLGA6L3A6NEY3 463 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 CAMTA2O94983 1202 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 MBD3O95983 291 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 CYP2E1P05181 493 aaPredicted RBP9.9□□□□□ -0.82
PNKP-231ENST00000640501 RPS6KB1P23443 525 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 GTF2E1P29083 439 aaPredicted RBP9.9□□□□□ -0.82
PNKP-231ENST00000640501 FKBP4Q02790 459 aaKnown RBP eCLIP9.9□□□□□ -0.82
PNKP-231ENST00000640501 ZMYM1Q5SVZ6 1142 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 RASEFQ8IZ41 740 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 SYAP1Q96A49 352 aaPredicted RBP9.9□□□□□ -0.82
PNKP-231ENST00000640501 NEK1Q96PY6 1258 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 PUS3Q9BZE2 481 aaKnown RBP9.9□□□□□ -0.82
PNKP-231ENST00000640501 IL25Q9H293 177 aa9.9□□□□□ -0.82
PNKP-231ENST00000640501 DDX49Q9Y6V7 483 aaKnown RBP9.9□□□□□ -0.82
PNKP-231ENST00000640501 SCN7AQ01118 1682 aa9.9□□□□□ -0.83
PNKP-231ENST00000640501 UBN2Q6ZU65 1347 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 ZPR1O75312 459 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 ITPK1Q13572 414 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 IMMTQ16891 758 aaKnown RBP9.89□□□□□ -0.83
PNKP-231ENST00000640501 WASHC4Q2M389 1173 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 KLHL40Q2TBA0 621 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 MCTP1Q6DN14 999 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 NOL8Q76FK4 1167 aaKnown RBP9.89□□□□□ -0.83
PNKP-231ENST00000640501 ZGPATQ8N5A5 531 aaKnown RBP9.89□□□□□ -0.83
PNKP-231ENST00000640501 APPBP2Q92624 585 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 GNL3LQ9NVN8 582 aaKnown RBP9.89□□□□□ -0.83
PNKP-231ENST00000640501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.89□□□□□ -0.83
PNKP-231ENST00000640501 RIC1Q4ADV7 1423 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 BTAF1O14981 1849 aa9.89□□□□□ -0.83
PNKP-231ENST00000640501 DDX60Q8IY21 1712 aaKnown RBP9.88□□□□□ -0.83
PNKP-231ENST00000640501 BRD1O95696 1058 aa9.88□□□□□ -0.83
PNKP-231ENST00000640501 SUSD4Q5VX71 490 aa9.88□□□□□ -0.83
PNKP-231ENST00000640501 CERKQ8TCT0 537 aa9.88□□□□□ -0.83
PNKP-231ENST00000640501 CCDC85AQ96PX6 553 aaPredicted RBP9.88□□□□□ -0.83
PNKP-231ENST00000640501 TRPC5Q9UL62 973 aaPredicted RBP9.88□□□□□ -0.83
PNKP-231ENST00000640501 RTCBQ9Y3I0 505 aaKnown RBP9.88□□□□□ -0.83
PNKP-231ENST00000640501 RPS6KA4O75676 772 aa9.87□□□□□ -0.83
PNKP-231ENST00000640501 PHF14O94880 888 aa9.87□□□□□ -0.83
PNKP-231ENST00000640501 NTSR2O95665 410 aa9.87□□□□□ -0.83
PNKP-231ENST00000640501 ARID4AP29374 1257 aaPredicted RBP9.87□□□□□ -0.83
PNKP-231ENST00000640501 MAP3K12Q12852 859 aa9.87□□□□□ -0.83
PNKP-231ENST00000640501 ZNF589Q86UQ0 364 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms