RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 RNF186Q9NXI6 227 aa23.43■■□□□ 1.34
VPS72-207ENST00000640458 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
VPS72-207ENST00000640458 DDX46Q7L014 1031 aaKnown RBP23.42■■□□□ 1.34
VPS72-207ENST00000640458 FANCIQ9NVI1 1328 aa23.41■■□□□ 1.34
VPS72-207ENST00000640458 RBM26Q5T8P6 1007 aaKnown RBP23.41■■□□□ 1.34
VPS72-207ENST00000640458 CCDC30Q5VVM6 783 aa23.41■■□□□ 1.34
VPS72-207ENST00000640458 ADM5C9JUS6 153 aa23.4■■□□□ 1.34
VPS72-207ENST00000640458 PSMD14O00487 310 aa23.4■■□□□ 1.34
VPS72-207ENST00000640458 PRPF38BQ5VTL8 546 aaKnown RBP23.4■■□□□ 1.34
VPS72-207ENST00000640458 ANKRD13DQ6ZTN6 518 aa23.4■■□□□ 1.34
VPS72-207ENST00000640458 MIER1Q8N108 512 aa23.4■■□□□ 1.34
VPS72-207ENST00000640458 PLBD2Q8NHP8 589 aa23.4■■□□□ 1.34
VPS72-207ENST00000640458 DPF2Q92785 391 aa23.4■■□□□ 1.34
VPS72-207ENST00000640458 DCPSQ96C86 337 aaKnown RBP23.4■■□□□ 1.34
VPS72-207ENST00000640458 EGFRP00533 1210 aa23.39■■□□□ 1.33
VPS72-207ENST00000640458 TCIRG1Q13488 830 aa23.39■■□□□ 1.33
VPS72-207ENST00000640458 GRAPQ13588 217 aa23.39■■□□□ 1.33
VPS72-207ENST00000640458 TWISTNBQ3B726 338 aaPredicted RBP23.39■■□□□ 1.33
VPS72-207ENST00000640458 GRAPLQ8TC17 118 aaPredicted RBP23.39■■□□□ 1.33
VPS72-207ENST00000640458 ZNF521Q96K83 1311 aa23.38■■□□□ 1.33
VPS72-207ENST00000640458 GOLGA2Q08379 1002 aa23.38■■□□□ 1.33
VPS72-207ENST00000640458 CTU1Q7Z7A3 348 aaKnown RBP23.38■■□□□ 1.33
VPS72-207ENST00000640458 DBNDD1Q9H9R9 158 aa23.38■■□□□ 1.33
VPS72-207ENST00000640458 SPINK5Q9NQ38 1064 aaPredicted RBP23.38■■□□□ 1.33
VPS72-207ENST00000640458 POLR2AP24928 1970 aaKnown RBP23.38■■□□□ 1.33
VPS72-207ENST00000640458 CSRNP1Q96S65 589 aa23.37■■□□□ 1.33
VPS72-207ENST00000640458 MYH16Q9H6N6 1097 aa23.37■■□□□ 1.33
VPS72-207ENST00000640458 RIMBP2O15034 1052 aa23.36■■□□□ 1.33
VPS72-207ENST00000640458 WASHC4Q2M389 1173 aa23.36■■□□□ 1.33
VPS72-207ENST00000640458 PHAXQ9H814 394 aaKnown RBP23.36■■□□□ 1.33
VPS72-207ENST00000640458 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
VPS72-207ENST00000640458 LAMB2P55268 1798 aa23.35■■□□□ 1.33
VPS72-207ENST00000640458 SLC10A3P09131 477 aa23.35■■□□□ 1.33
VPS72-207ENST00000640458 NLRP10Q86W26 655 aa23.35■■□□□ 1.33
VPS72-207ENST00000640458 AKAP11Q9UKA4 1901 aa23.35■■□□□ 1.33
VPS72-207ENST00000640458 EXOSC9Q06265 439 aaKnown RBP23.34■■□□□ 1.33
VPS72-207ENST00000640458 TMC4Q7Z404 712 aa23.34■■□□□ 1.33
VPS72-207ENST00000640458 NSFL1CQ9UNZ2 370 aaKnown RBP23.34■■□□□ 1.33
VPS72-207ENST00000640458 TAF1P21675 1872 aa23.34■■□□□ 1.33
VPS72-207ENST00000640458 ANKRD36CQ5JPF3 1778 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 DUOX1Q9NRD9 1551 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 VAMP4O75379 141 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 SULF1Q8IWU6 871 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 ZNF428Q96B54 188 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 ISCA1Q9BUE6 129 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 STK31Q9BXU1 1019 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 KCNQ5Q9NR82 932 aa23.33■■□□□ 1.33
VPS72-207ENST00000640458 SH3TC1Q8TE82 1336 aa23.33■■□□□ 1.32
VPS72-207ENST00000640458 C6orf229H3BNL8 230 aa23.32■■□□□ 1.32
VPS72-207ENST00000640458 RPS12P25398 132 aaKnown RBP23.32■■□□□ 1.32
VPS72-207ENST00000640458 DOK7Q18PE1 504 aa23.32■■□□□ 1.32
VPS72-207ENST00000640458 RIC3Q7Z5B4 369 aa23.32■■□□□ 1.32
VPS72-207ENST00000640458 HPS5Q9UPZ3 1129 aa23.32■■□□□ 1.32
VPS72-207ENST00000640458 KIF4BQ2VIQ3 1234 aa23.31■■□□□ 1.32
VPS72-207ENST00000640458 GGA3Q9NZ52 723 aa23.31■■□□□ 1.32
VPS72-207ENST00000640458 ECE2O60344 883 aa23.3■■□□□ 1.32
VPS72-207ENST00000640458 DDX58O95786 925 aaKnown RBP23.3■■□□□ 1.32
VPS72-207ENST00000640458 TRIM28Q13263 835 aaKnown RBP23.3■■□□□ 1.32
VPS72-207ENST00000640458 SLC4A2P04920 1241 aa23.29■■□□□ 1.32
VPS72-207ENST00000640458 CDCA5Q96FF9 252 aa23.29■■□□□ 1.32
VPS72-207ENST00000640458 POLLQ9UGP5 575 aa23.29■■□□□ 1.32
VPS72-207ENST00000640458 HDAC9Q9UKV0 1011 aa23.29■■□□□ 1.32
VPS72-207ENST00000640458 ASTN2O75129 1339 aaPredicted RBP23.29■■□□□ 1.32
VPS72-207ENST00000640458 RTL9Q8NET4 1388 aa23.28■■□□□ 1.32
VPS72-207ENST00000640458 ATP5J2-PTCD1G3V325 749 aa23.28■■□□□ 1.32
VPS72-207ENST00000640458 GPSM2P81274 684 aa23.28■■□□□ 1.32
VPS72-207ENST00000640458 RASAL3Q86YV0 1011 aa23.28■■□□□ 1.32
VPS72-207ENST00000640458 REM2Q8IYK8 340 aaPredicted RBP23.28■■□□□ 1.32
VPS72-207ENST00000640458 CELF1Q92879 486 aaKnown RBP23.28■■□□□ 1.32
VPS72-207ENST00000640458 E9PSI1 815 aa23.26■■□□□ 1.31
VPS72-207ENST00000640458 KSR2Q6VAB6 950 aa23.26■■□□□ 1.31
VPS72-207ENST00000640458 G2E3Q7L622 706 aa23.26■■□□□ 1.31
VPS72-207ENST00000640458 EYA3Q99504 573 aa23.26■■□□□ 1.31
VPS72-207ENST00000640458 METTL22Q9BUU2 404 aaPredicted RBP23.26■■□□□ 1.31
VPS72-207ENST00000640458 LRRC37AA6NMS7 1700 aa23.25■■□□□ 1.31
VPS72-207ENST00000640458 PKN2Q16513 984 aaKnown RBP23.25■■□□□ 1.31
VPS72-207ENST00000640458 MYD88Q99836 296 aa23.25■■□□□ 1.31
VPS72-207ENST00000640458 PI4KAP2A4QPH2 592 aa23.24■■□□□ 1.31
VPS72-207ENST00000640458 TBC1D8O95759 1140 aa23.24■■□□□ 1.31
VPS72-207ENST00000640458 SLFN5Q08AF3 891 aa23.24■■□□□ 1.31
VPS72-207ENST00000640458 PI4KAP1Q8N8J0 262 aa23.24■■□□□ 1.31
VPS72-207ENST00000640458 ZNF296Q8WUU4 475 aaPredicted RBP23.24■■□□□ 1.31
VPS72-207ENST00000640458 MAP3K2Q9Y2U5 619 aa23.24■■□□□ 1.31
VPS72-207ENST00000640458 G3V3G9 751 aa23.23■■□□□ 1.31
VPS72-207ENST00000640458 VIL1P09327 827 aaKnown RBP23.23■■□□□ 1.31
VPS72-207ENST00000640458 FLIIQ13045 1269 aa23.23■■□□□ 1.31
VPS72-207ENST00000640458 SCARF1Q14162 830 aa23.23■■□□□ 1.31
VPS72-207ENST00000640458 DCAF8Q5TAQ9 597 aa23.23■■□□□ 1.31
VPS72-207ENST00000640458 ANGEL2Q5VTE6 544 aaKnown RBP23.23■■□□□ 1.31
VPS72-207ENST00000640458 CCDC191Q8NCU4 936 aa23.22■■□□□ 1.31
VPS72-207ENST00000640458 TBC1D16Q8TBP0 767 aa23.22■■□□□ 1.31
VPS72-207ENST00000640458 FAM89AQ96GI7 184 aa23.22■■□□□ 1.31
VPS72-207ENST00000640458 ZC3H12CQ9C0D7 883 aaKnown RBP23.22■■□□□ 1.31
VPS72-207ENST00000640458 SF3B3Q15393 1217 aaKnown RBP23.21■■□□□ 1.31
VPS72-207ENST00000640458 MOB2Q70IA6 237 aa23.21■■□□□ 1.31
VPS72-207ENST00000640458 FKBP1BP68106 108 aa23.2■■□□□ 1.3
VPS72-207ENST00000640458 RTL5Q5HYW3 569 aaPredicted RBP23.2■■□□□ 1.3
VPS72-207ENST00000640458 ZBTB38Q8NAP3 1195 aaPredicted RBP23.2■■□□□ 1.3
VPS72-207ENST00000640458 TRMT2AQ8IZ69 625 aaKnown RBP23.19■■□□□ 1.3
VPS72-207ENST00000640458 CDCA7LQ96GN5 454 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms