RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 USP25Q9UHP3 1055 aa10.65□□□□□ -0.7
RTTN-216ENST00000640376 SPEF2Q9C093 1822 aa10.65□□□□□ -0.71
RTTN-216ENST00000640376 SOS2Q07890 1332 aaPredicted RBP10.65□□□□□ -0.71
RTTN-216ENST00000640376 KAT6BQ8WYB5 2073 aa10.65□□□□□ -0.71
RTTN-216ENST00000640376 FAM184AQ8NB25 1140 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 GTF3C6Q969F1 213 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 ZKSCAN5Q9Y2L8 839 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 KDM4FA0A1W2PPD8 638 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 EYA2O00167 538 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 LETM1O95202 739 aaPredicted RBP10.64□□□□□ -0.71
RTTN-216ENST00000640376 FGD1P98174 961 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 STOX1Q6ZVD7 989 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 CARD10Q9BWT7 1032 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 PUS3Q9BZE2 481 aaKnown RBP10.64□□□□□ -0.71
RTTN-216ENST00000640376 ITGB4P16144 1822 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
RTTN-216ENST00000640376 NKX1-1Q15270 411 aaPredicted RBP10.64□□□□□ -0.71
RTTN-216ENST00000640376 CCDC85AQ96PX6 553 aaPredicted RBP10.64□□□□□ -0.71
RTTN-216ENST00000640376 MYH7P12883 1935 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 IFIT1P09914 478 aaKnown RBP10.63□□□□□ -0.71
RTTN-216ENST00000640376 BRF1Q92994 677 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 TMOD3Q9NYL9 352 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 EVA1CP58658 441 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 DDX11Q96FC9 970 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 SLAIN2Q9P270 581 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 A0A0G2JLW4 131 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 MPNDQ8N594 471 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 GPR108Q9NPR9 543 aa10.63□□□□□ -0.71
RTTN-216ENST00000640376 MAST3O60307 1309 aa10.62□□□□□ -0.71
RTTN-216ENST00000640376 ZNF335Q9H4Z2 1342 aaPredicted RBP10.62□□□□□ -0.71
RTTN-216ENST00000640376 TFIP11Q9UBB9 837 aaKnown RBP10.62□□□□□ -0.71
RTTN-216ENST00000640376 FOSBP53539 338 aa10.62□□□□□ -0.71
RTTN-216ENST00000640376 ZMYM1Q5SVZ6 1142 aa10.62□□□□□ -0.71
RTTN-216ENST00000640376 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.62□□□□□ -0.71
RTTN-216ENST00000640376 FUCA2Q9BTY2 467 aa10.62□□□□□ -0.71
RTTN-216ENST00000640376 HELLSQ9NRZ9 838 aa10.62□□□□□ -0.71
RTTN-216ENST00000640376 NWD2Q9ULI1 1742 aa10.62□□□□□ -0.71
RTTN-216ENST00000640376 MYH3P11055 1940 aa10.62□□□□□ -0.71
RTTN-216ENST00000640376 NHSL1Q5SYE7 1610 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 ZNF500O60304 480 aaPredicted RBP10.61□□□□□ -0.71
RTTN-216ENST00000640376 OFD1O75665 1012 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 PDIA4P13667 645 aaKnown RBP10.61□□□□□ -0.71
RTTN-216ENST00000640376 LIG1P18858 919 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 SCRN1Q12765 414 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 CCDC57Q2TAC2 916 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 UVSSAQ2YD98 709 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 SPATA32Q96LK8 384 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 ANKRD36CQ5JPF3 1778 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 ELP1O95163 1332 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 CIAO1O76071 339 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 PLCB2Q00722 1185 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
RTTN-216ENST00000640376 DNAJC10Q8IXB1 793 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 ISCA1Q9BUE6 129 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 CEP126Q9P2H0 1117 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 ASAP1Q9ULH1 1129 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 M0R2C6 588 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 ADCY5O95622 1261 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 ADORA1P30542 326 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 TCIRG1Q13488 830 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 CAMK4Q16566 473 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 KIF6Q6ZMV9 814 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 FAM89AQ96GI7 184 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 DSCC1Q9BVC3 393 aa10.61□□□□□ -0.71
RTTN-216ENST00000640376 NAP1L2Q9ULW6 460 aaPredicted RBP10.61□□□□□ -0.71
RTTN-216ENST00000640376 H3BQV1 296 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 HSPD1P10809 573 aaKnown RBP10.6□□□□□ -0.71
RTTN-216ENST00000640376 APOBRQ0VD83 1088 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 GORABQ5T7V8 394 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
RTTN-216ENST00000640376 NUP62CLQ9H1M0 184 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
RTTN-216ENST00000640376 GOLGA6L4A6NEF3 574 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 RNF113AO15541 343 aaKnown RBP10.6□□□□□ -0.71
RTTN-216ENST00000640376 TAF7LQ5H9L4 462 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 TTC39AQ5SRH9 613 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 DHX32Q7L7V1 743 aaKnown RBP10.6□□□□□ -0.71
RTTN-216ENST00000640376 LEO1Q8WVC0 666 aaPredicted RBP10.6□□□□□ -0.71
RTTN-216ENST00000640376 ATG3Q9NT62 314 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 HMGB1P09429 215 aaKnown RBP10.6□□□□□ -0.71
RTTN-216ENST00000640376 MCM5P33992 734 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 RESTQ13127 1097 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 HSP90AB3PQ58FF7 597 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 CHST3Q7LGC8 479 aa10.6□□□□□ -0.71
RTTN-216ENST00000640376 MYO5AQ9Y4I1 1855 aaKnown RBP10.59□□□□□ -0.71
RTTN-216ENST00000640376 E7EWF7 191 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 CCDC192P0DO97 292 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 TTLL5Q6EMB2 1281 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 RIC1Q4ADV7 1423 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 GPTP24298 496 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 CCT2P78371 535 aaKnown RBP10.59□□□□□ -0.71
RTTN-216ENST00000640376 MAP3K11Q16584 847 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 PIGBQ92521 554 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 OSBP2Q969R2 916 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 DACT1Q9NYF0 836 aa10.59□□□□□ -0.71
RTTN-216ENST00000640376 PTPDC1A2A3K4 754 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms