RNA–Protein interactions for RNA: ENST00000639358.1

KCNQ3-207, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-207ENST00000639358 SF3B3Q15393 1217 aaKnown RBP17.34■□□□□ 0.37
KCNQ3-207ENST00000639358 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
KCNQ3-207ENST00000639358 ZNF296Q8WUU4 475 aaPredicted RBP17.34■□□□□ 0.37
KCNQ3-207ENST00000639358 CELF1Q92879 486 aaKnown RBP17.34■□□□□ 0.37
KCNQ3-207ENST00000639358 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
KCNQ3-207ENST00000639358 AKAP11Q9UKA4 1901 aa17.33■□□□□ 0.37
KCNQ3-207ENST00000639358 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.37
KCNQ3-207ENST00000639358 DUOX1Q9NRD9 1551 aa17.33■□□□□ 0.37
KCNQ3-207ENST00000639358 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
KCNQ3-207ENST00000639358 ANGEL2Q5VTE6 544 aaKnown RBP17.33■□□□□ 0.36
KCNQ3-207ENST00000639358 TBC1D16Q8TBP0 767 aa17.33■□□□□ 0.36
KCNQ3-207ENST00000639358 NECTIN2Q92692 538 aa17.33■□□□□ 0.36
KCNQ3-207ENST00000639358 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
KCNQ3-207ENST00000639358 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
KCNQ3-207ENST00000639358 FAM89AQ96GI7 184 aa17.32■□□□□ 0.36
KCNQ3-207ENST00000639358 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
KCNQ3-207ENST00000639358 ZNF280AP59817 542 aaPredicted RBP17.31■□□□□ 0.36
KCNQ3-207ENST00000639358 NOM1Q5C9Z4 860 aaKnown RBP17.31■□□□□ 0.36
KCNQ3-207ENST00000639358 FBXO46Q6PJ61 603 aaPredicted RBP17.31■□□□□ 0.36
KCNQ3-207ENST00000639358 ZNF428Q96B54 188 aa17.31■□□□□ 0.36
KCNQ3-207ENST00000639358 RSBN1LQ6PCB5 846 aaPredicted RBP17.3■□□□□ 0.36
KCNQ3-207ENST00000639358 ANKIB1Q9P2G1 1089 aa17.3■□□□□ 0.36
KCNQ3-207ENST00000639358 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 PITPNM2Q9BZ72 1349 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 GPR25O00155 361 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 TM4SF4P48230 202 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 RIPK4P57078 832 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 ANKRD13DQ6ZTN6 518 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 PLBD2Q8NHP8 589 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 GGA1Q9UJY5 639 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 LAMB2P55268 1798 aa17.29■□□□□ 0.36
KCNQ3-207ENST00000639358 UBE2Q2LH0YL09 131 aa17.28■□□□□ 0.36
KCNQ3-207ENST00000639358 UFL1O94874 794 aa17.28■□□□□ 0.36
KCNQ3-207ENST00000639358 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
KCNQ3-207ENST00000639358 HSP90B1P14625 803 aaKnown RBP17.28■□□□□ 0.36
KCNQ3-207ENST00000639358 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
KCNQ3-207ENST00000639358 MYOZ2Q9NPC6 264 aa17.28■□□□□ 0.36
KCNQ3-207ENST00000639358 LRRC37AA6NMS7 1700 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 ATP5J2-PTCD1G3V325 749 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 IRS4O14654 1257 aaPredicted RBP17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 FKTNO75072 461 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 NF2P35240 595 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 LMOD3Q0VAK6 560 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 SREBF2Q12772 1141 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 MOB2Q70IA6 237 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 ISCA1Q9BUE6 129 aa17.27■□□□□ 0.36
KCNQ3-207ENST00000639358 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
KCNQ3-207ENST00000639358 TAF1P21675 1872 aa17.25■□□□□ 0.35
KCNQ3-207ENST00000639358 HABP4Q5JVS0 413 aaKnown RBP17.25■□□□□ 0.35
KCNQ3-207ENST00000639358 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
KCNQ3-207ENST00000639358 PAPPA2Q9BXP8 1791 aa17.25■□□□□ 0.35
KCNQ3-207ENST00000639358 ZNF609O15014 1411 aa17.24■□□□□ 0.35
KCNQ3-207ENST00000639358 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
KCNQ3-207ENST00000639358 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
KCNQ3-207ENST00000639358 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
KCNQ3-207ENST00000639358 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
KCNQ3-207ENST00000639358 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
KCNQ3-207ENST00000639358 GMLQ99445 158 aa17.24■□□□□ 0.35
KCNQ3-207ENST00000639358 ALDH1A1P00352 501 aa17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 HDGFL1Q5TGJ6 251 aa17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 PRAMEF18Q5VWM3 479 aa17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 INTS3Q68E01 1043 aaKnown RBP17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 OGFOD1Q8N543 542 aa17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 CFHR5Q9BXR6 569 aa17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 DBF4Q9UBU7 674 aaPredicted RBP17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 SCAF8Q9UPN6 1271 aaKnown RBP17.23■□□□□ 0.35
KCNQ3-207ENST00000639358 DDX60Q8IY21 1712 aaKnown RBP17.22■□□□□ 0.35
KCNQ3-207ENST00000639358 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
KCNQ3-207ENST00000639358 ARMC9Q7Z3E5 817 aa17.22■□□□□ 0.35
KCNQ3-207ENST00000639358 ZBTB38Q8NAP3 1195 aaPredicted RBP17.22■□□□□ 0.35
KCNQ3-207ENST00000639358 SEC31BQ9NQW1 1179 aa17.22■□□□□ 0.35
KCNQ3-207ENST00000639358 ATP2B4P23634 1241 aa17.21■□□□□ 0.35
KCNQ3-207ENST00000639358 NBPF9Q3BBW0 867 aa17.21■□□□□ 0.35
KCNQ3-207ENST00000639358 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
KCNQ3-207ENST00000639358 LAS1LQ9Y4W2 734 aaKnown RBP17.21■□□□□ 0.35
KCNQ3-207ENST00000639358 XDHP47989 1333 aa17.21■□□□□ 0.34
KCNQ3-207ENST00000639358 CHL1O00533 1208 aa17.2■□□□□ 0.34
KCNQ3-207ENST00000639358 HOXB7P09629 217 aa17.2■□□□□ 0.34
KCNQ3-207ENST00000639358 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
KCNQ3-207ENST00000639358 INHBEP58166 350 aa17.2■□□□□ 0.34
KCNQ3-207ENST00000639358 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
KCNQ3-207ENST00000639358 MMP14P50281 582 aa17.19■□□□□ 0.34
KCNQ3-207ENST00000639358 PTPN12Q05209 780 aaKnown RBP17.19■□□□□ 0.34
KCNQ3-207ENST00000639358 RIC3Q7Z5B4 369 aa17.19■□□□□ 0.34
KCNQ3-207ENST00000639358 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
KCNQ3-207ENST00000639358 TRIM17Q9Y577 477 aa17.19■□□□□ 0.34
KCNQ3-207ENST00000639358 WNT10BO00744 389 aa17.18■□□□□ 0.34
KCNQ3-207ENST00000639358 R3HDMLQ9H3Y0 253 aa17.18■□□□□ 0.34
KCNQ3-207ENST00000639358 SCN9AQ15858 1988 aa17.18■□□□□ 0.34
KCNQ3-207ENST00000639358 PDE8AO60658 829 aa17.17■□□□□ 0.34
KCNQ3-207ENST00000639358 PRKG1Q13976 671 aa17.17■□□□□ 0.34
KCNQ3-207ENST00000639358 SPRYD7Q5W111 196 aa17.17■□□□□ 0.34
KCNQ3-207ENST00000639358 MYO3BQ8WXR4 1341 aa17.17■□□□□ 0.34
KCNQ3-207ENST00000639358 MANSC4A6NHS7 340 aaPredicted RBP17.16■□□□□ 0.34
KCNQ3-207ENST00000639358 GOLGA2Q08379 1002 aa17.16■□□□□ 0.34
KCNQ3-207ENST00000639358 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
KCNQ3-207ENST00000639358 OTOP1Q7RTM1 612 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms