RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 ADAMTSL1Q8N6G6 1762 aa22.58■■□□□ 1.21
SPIN3-220ENST00000639257 YDJCA8MPS7 323 aa22.58■■□□□ 1.21
SPIN3-220ENST00000639257 WASHC4Q2M389 1173 aa22.58■■□□□ 1.21
SPIN3-220ENST00000639257 LMBR1LQ6UX01 489 aa22.58■■□□□ 1.21
SPIN3-220ENST00000639257 A0A1B0GUL6 1792 aa22.58■■□□□ 1.2
SPIN3-220ENST00000639257 IQCA1LA6NCM1 817 aa22.57■■□□□ 1.2
SPIN3-220ENST00000639257 CCT4P50991 539 aaKnown RBP22.57■■□□□ 1.2
SPIN3-220ENST00000639257 CXCL9Q07325 125 aa22.57■■□□□ 1.2
SPIN3-220ENST00000639257 FSTL1Q12841 308 aa22.57■■□□□ 1.2
SPIN3-220ENST00000639257 EYA3Q99504 573 aa22.57■■□□□ 1.2
SPIN3-220ENST00000639257 GGA1Q9UJY5 639 aa22.57■■□□□ 1.2
SPIN3-220ENST00000639257 ANKRD18BA2A2Z9 1011 aa22.56■■□□□ 1.2
SPIN3-220ENST00000639257 C6orf229H3BNL8 230 aa22.56■■□□□ 1.2
SPIN3-220ENST00000639257 IGHMBP2P38935 993 aaKnown RBP22.56■■□□□ 1.2
SPIN3-220ENST00000639257 SCNN1DP51172 638 aa22.56■■□□□ 1.2
SPIN3-220ENST00000639257 TAF1DQ9H5J8 278 aaPredicted RBP22.56■■□□□ 1.2
SPIN3-220ENST00000639257 ANKIB1Q9P2G1 1089 aa22.56■■□□□ 1.2
SPIN3-220ENST00000639257 UFL1O94874 794 aa22.55■■□□□ 1.2
SPIN3-220ENST00000639257 ATP2B4P23634 1241 aa22.55■■□□□ 1.2
SPIN3-220ENST00000639257 IFIT5Q13325 482 aaKnown RBP22.55■■□□□ 1.2
SPIN3-220ENST00000639257 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
SPIN3-220ENST00000639257 SCN9AQ15858 1988 aa22.54■■□□□ 1.2
SPIN3-220ENST00000639257 MED23Q9ULK4 1368 aa22.54■■□□□ 1.2
SPIN3-220ENST00000639257 BCAR3O75815 825 aa22.54■■□□□ 1.2
SPIN3-220ENST00000639257 INTS3Q68E01 1043 aaKnown RBP22.54■■□□□ 1.2
SPIN3-220ENST00000639257 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
SPIN3-220ENST00000639257 GPR101Q96P66 508 aaPredicted RBP22.54■■□□□ 1.2
SPIN3-220ENST00000639257 HACL1Q9UJ83 578 aa22.54■■□□□ 1.2
SPIN3-220ENST00000639257 PSME4Q14997 1843 aa22.53■■□□□ 1.2
SPIN3-220ENST00000639257 WTIPA6NIX2 430 aaPredicted RBP22.53■■□□□ 1.2
SPIN3-220ENST00000639257 HSPA6P17066 643 aa22.53■■□□□ 1.2
SPIN3-220ENST00000639257 SMC1BQ8NDV3 1235 aa22.53■■□□□ 1.2
SPIN3-220ENST00000639257 BICC1Q9H694 974 aaKnown RBP22.53■■□□□ 1.2
SPIN3-220ENST00000639257 ZNF609O15014 1411 aa22.53■■□□□ 1.2
SPIN3-220ENST00000639257 TRIM27P14373 513 aa22.52■■□□□ 1.2
SPIN3-220ENST00000639257 CIAPIN1Q6FI81 312 aa22.52■■□□□ 1.2
SPIN3-220ENST00000639257 MPHOSPH8Q99549 860 aa22.52■■□□□ 1.2
SPIN3-220ENST00000639257 ZC3H12CQ9C0D7 883 aaKnown RBP22.52■■□□□ 1.2
SPIN3-220ENST00000639257 ANKRD2Q9GZV1 360 aa22.52■■□□□ 1.2
SPIN3-220ENST00000639257 LEMD3Q9Y2U8 911 aa22.52■■□□□ 1.2
SPIN3-220ENST00000639257 IRS2Q9Y4H2 1338 aa22.52■■□□□ 1.2
SPIN3-220ENST00000639257 RIMBP2O15034 1052 aa22.51■■□□□ 1.19
SPIN3-220ENST00000639257 ECE2O60344 883 aa22.51■■□□□ 1.19
SPIN3-220ENST00000639257 CHRNDQ07001 517 aa22.51■■□□□ 1.19
SPIN3-220ENST00000639257 ATF7IPQ6VMQ6 1270 aa22.51■■□□□ 1.19
SPIN3-220ENST00000639257 DBNDD1Q9H9R9 158 aa22.51■■□□□ 1.19
SPIN3-220ENST00000639257 IPO8O15397 1037 aaKnown RBP22.5■■□□□ 1.19
SPIN3-220ENST00000639257 POTEIP0CG38 1075 aa22.5■■□□□ 1.19
SPIN3-220ENST00000639257 POTEJP0CG39 1038 aa22.5■■□□□ 1.19
SPIN3-220ENST00000639257 EPHX2P34913 555 aa22.5■■□□□ 1.19
SPIN3-220ENST00000639257 TNIP1Q15025 636 aa22.5■■□□□ 1.19
SPIN3-220ENST00000639257 CCDC57Q2TAC2 916 aa22.5■■□□□ 1.19
SPIN3-220ENST00000639257 GPRC5DQ9NZD1 345 aa22.5■■□□□ 1.19
SPIN3-220ENST00000639257 GJA3Q9Y6H8 435 aa22.5■■□□□ 1.19
SPIN3-220ENST00000639257 ZNF646O15015 1829 aaPredicted RBP22.5■■□□□ 1.19
SPIN3-220ENST00000639257 RAD17O75943 681 aa22.49■■□□□ 1.19
SPIN3-220ENST00000639257 C15orf52Q6ZUT6 534 aaKnown RBP22.49■■□□□ 1.19
SPIN3-220ENST00000639257 ZNF594Q96JF6 807 aaPredicted RBP22.49■■□□□ 1.19
SPIN3-220ENST00000639257 DOK7Q18PE1 504 aa22.48■■□□□ 1.19
SPIN3-220ENST00000639257 PNMA8AQ86V59 439 aaPredicted RBP22.48■■□□□ 1.19
SPIN3-220ENST00000639257 LDHDQ86WU2 507 aa22.48■■□□□ 1.19
SPIN3-220ENST00000639257 CHMP3Q9Y3E7 222 aa22.48■■□□□ 1.19
SPIN3-220ENST00000639257 ZNF804BA4D1E1 1349 aa22.48■■□□□ 1.19
SPIN3-220ENST00000639257 EPS15P42566 896 aa22.47■■□□□ 1.19
SPIN3-220ENST00000639257 GMPSP49915 693 aaPredicted RBP22.47■■□□□ 1.19
SPIN3-220ENST00000639257 PODNQ7Z5L7 613 aa22.47■■□□□ 1.19
SPIN3-220ENST00000639257 DPF2Q92785 391 aa22.47■■□□□ 1.19
SPIN3-220ENST00000639257 KCNQ5Q9NR82 932 aa22.47■■□□□ 1.19
SPIN3-220ENST00000639257 TNNQ9UQP3 1299 aa22.47■■□□□ 1.19
SPIN3-220ENST00000639257 PSMD14O00487 310 aa22.46■■□□□ 1.19
SPIN3-220ENST00000639257 RFX5P48382 616 aaPredicted RBP22.46■■□□□ 1.19
SPIN3-220ENST00000639257 CHADLQ6NUI6 762 aa22.46■■□□□ 1.19
SPIN3-220ENST00000639257 LDHAL6AQ6ZMR3 332 aa22.46■■□□□ 1.19
SPIN3-220ENST00000639257 TXNRD3Q86VQ6 643 aa22.46■■□□□ 1.19
SPIN3-220ENST00000639257 RIPOR2Q9Y4F9 1068 aa22.46■■□□□ 1.19
SPIN3-220ENST00000639257 VIL1P09327 827 aaKnown RBP22.45■■□□□ 1.18
SPIN3-220ENST00000639257 RPS12P25398 132 aaKnown RBP22.45■■□□□ 1.18
SPIN3-220ENST00000639257 LMOD1P29536 600 aaPredicted RBP22.45■■□□□ 1.18
SPIN3-220ENST00000639257 MEIS3Q99687 375 aa22.45■■□□□ 1.18
SPIN3-220ENST00000639257 UBTFL1P0CB47 393 aaPredicted RBP22.44■■□□□ 1.18
SPIN3-220ENST00000639257 KLRK1P26718 216 aa22.44■■□□□ 1.18
SPIN3-220ENST00000639257 ZKSCAN2Q63HK3 967 aa22.44■■□□□ 1.18
SPIN3-220ENST00000639257 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
SPIN3-220ENST00000639257 PUS3Q9BZE2 481 aaKnown RBP22.43■■□□□ 1.18
SPIN3-220ENST00000639257 COA1Q9GZY4 146 aa22.43■■□□□ 1.18
SPIN3-220ENST00000639257 ADARB2Q9NS39 739 aaKnown RBP22.43■■□□□ 1.18
SPIN3-220ENST00000639257 PASKQ96RG2 1323 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 SNAP23O00161 211 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 TAF5LO75529 589 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 ITGBL1O95965 494 aaPredicted RBP22.42■■□□□ 1.18
SPIN3-220ENST00000639257 APLP1P51693 650 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 TAF7LQ5H9L4 462 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 VGLL2Q8N8G2 317 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 FRAT1Q92837 279 aaPredicted RBP22.42■■□□□ 1.18
SPIN3-220ENST00000639257 GMLQ99445 158 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 CNNM1Q9NRU3 951 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 ZBTB12Q9Y330 459 aaPredicted RBP22.42■■□□□ 1.18
SPIN3-220ENST00000639257 CEP350Q5VT06 3117 aa22.42■■□□□ 1.18
SPIN3-220ENST00000639257 MROH5Q6ZUA9 1318 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms