RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 JAKMIP1Q96N16 626 aaKnown RBP12.96□□□□□ -0.33
TARDBP-230ENST00000639083 SLC27A2O14975 620 aa12.96□□□□□ -0.34
TARDBP-230ENST00000639083 NTSR2O95665 410 aa12.96□□□□□ -0.34
TARDBP-230ENST00000639083 GSE1Q14687 1217 aa12.96□□□□□ -0.34
TARDBP-230ENST00000639083 ATP2B3Q16720 1220 aa12.96□□□□□ -0.34
TARDBP-230ENST00000639083 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.34
TARDBP-230ENST00000639083 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 AK2P54819 239 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 VGLL2Q8N8G2 317 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 SEC31BQ9NQW1 1179 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 ZNF652Q9Y2D9 606 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 RFX7Q2KHR2 1363 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 PDE8BO95263 885 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 NUCB2P80303 420 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 SCARF1Q14162 830 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 CLEC4GQ6UXB4 293 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
TARDBP-230ENST00000639083 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.95□□□□□ -0.34
TARDBP-230ENST00000639083 TM6SF1Q9BZW5 370 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
TARDBP-230ENST00000639083 RREB1Q92766 1687 aa12.94□□□□□ -0.34
TARDBP-230ENST00000639083 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
TARDBP-230ENST00000639083 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
TARDBP-230ENST00000639083 TAF6LQ9Y6J9 622 aa12.94□□□□□ -0.34
TARDBP-230ENST00000639083 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
TARDBP-230ENST00000639083 COL9A3Q14050 684 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-230ENST00000639083 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 INTS4Q96HW7 963 aaKnown RBP12.93□□□□□ -0.34
TARDBP-230ENST00000639083 PDRG1Q9NUG6 133 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 CYP46A1Q9Y6A2 500 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 CICQ96RK0 1608 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-230ENST00000639083 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-230ENST00000639083 CYP2E1P05181 493 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-230ENST00000639083 ZAP70P43403 619 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-230ENST00000639083 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
TARDBP-230ENST00000639083 DDX11L8A8MPP1 907 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 CCDC152Q4G0S7 254 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
TARDBP-230ENST00000639083 VPS53Q5VIR6 699 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 HELLSQ9NRZ9 838 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
TARDBP-230ENST00000639083 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 GNPATO15228 680 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 RNF113AO15541 343 aaKnown RBP12.92□□□□□ -0.34
TARDBP-230ENST00000639083 RPS6KA4O75676 772 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
TARDBP-230ENST00000639083 COL5A3P25940 1745 aaPredicted RBP12.92□□□□□ -0.34
TARDBP-230ENST00000639083 MYH3P11055 1940 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 SNAP23O00161 211 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 TRAK2O60296 914 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
TARDBP-230ENST00000639083 PSMA5P28066 241 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 MCAMP43121 646 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 BCL2L12Q9HB09 334 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 EP400Q96L91 3159 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 BAG4O95429 457 aaKnown RBP12.91□□□□□ -0.34
TARDBP-230ENST00000639083 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 CLEC17AQ6ZS10 378 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
TARDBP-230ENST00000639083 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
TARDBP-230ENST00000639083 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
TARDBP-230ENST00000639083 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
TARDBP-230ENST00000639083 RPAP1Q9BWH6 1393 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-230ENST00000639083 FGFR2P21802 821 aa12.9□□□□□ -0.34
TARDBP-230ENST00000639083 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
TARDBP-230ENST00000639083 CCDC102BQ68D86 513 aa12.9□□□□□ -0.34
TARDBP-230ENST00000639083 AMIGO3Q86WK7 504 aa12.9□□□□□ -0.34
TARDBP-230ENST00000639083 LPIN2Q92539 896 aa12.9□□□□□ -0.34
TARDBP-230ENST00000639083 OSBP2Q969R2 916 aa12.9□□□□□ -0.34
TARDBP-230ENST00000639083 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
TARDBP-230ENST00000639083 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
TARDBP-230ENST00000639083 LARGE1O95461 756 aa12.9□□□□□ -0.35
TARDBP-230ENST00000639083 CYP21A2P08686 494 aa12.9□□□□□ -0.35
TARDBP-230ENST00000639083 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.35
TARDBP-230ENST00000639083 PHKA1P46020 1223 aa12.9□□□□□ -0.35
TARDBP-230ENST00000639083 FOXD4L5Q5VV16 416 aaPredicted RBP12.9□□□□□ -0.35
TARDBP-230ENST00000639083 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.35
TARDBP-230ENST00000639083 FOXD4L4Q8WXT5 416 aaPredicted RBP12.9□□□□□ -0.35
TARDBP-230ENST00000639083 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.35
TARDBP-230ENST00000639083 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.35
TARDBP-230ENST00000639083 MAST3O60307 1309 aa12.89□□□□□ -0.35
TARDBP-230ENST00000639083 M0R2C6 588 aa12.89□□□□□ -0.35
TARDBP-230ENST00000639083 HSPD1P10809 573 aaKnown RBP12.89□□□□□ -0.35
TARDBP-230ENST00000639083 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-230ENST00000639083 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
TARDBP-230ENST00000639083 ZNF512BQ96KM6 892 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-230ENST00000639083 BTAF1O14981 1849 aa12.89□□□□□ -0.35
TARDBP-230ENST00000639083 ABCC12Q96J65 1359 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms