RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 GHRHP01286 108 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 EPB42P16452 691 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 RXRBP28702 533 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 TXNDC11Q6PKC3 985 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 DBX2Q6ZNG2 339 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 KIAA1211Q6ZU35 1233 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 ATG4DQ86TL0 474 aaPredicted RBP3.52□□□□□ -1.85
LMBR1-222ENST00000638959 DDRGK1Q96HY6 314 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 METTL22Q9BUU2 404 aaPredicted RBP3.52□□□□□ -1.85
LMBR1-222ENST00000638959 MUC3BQ9H195 1237 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 KCNK4Q9NYG8 393 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 PPME1Q9Y570 386 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 PCDHGA11Q9Y5H2 935 aa3.52□□□□□ -1.85
LMBR1-222ENST00000638959 LINC01387J3KSC0 135 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 J3QW42 95 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 TSPAN15O95858 294 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 TARSP26639 723 aaKnown RBP3.51□□□□□ -1.85
LMBR1-222ENST00000638959 MAP4P27816 1152 aaKnown RBP3.51□□□□□ -1.85
LMBR1-222ENST00000638959 HIRAP54198 1017 aaPredicted RBP3.51□□□□□ -1.85
LMBR1-222ENST00000638959 NRLP54845 237 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 PLCB2Q00722 1185 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 ANKRD34AQ69YU3 496 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 ANKLE2Q86XL3 938 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 RBSNQ9H1K0 784 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 TRIM33Q9UPN9 1127 aa3.51□□□□□ -1.85
LMBR1-222ENST00000638959 HAP1P54257 671 aaPredicted RBP3.5□□□□□ -1.85
LMBR1-222ENST00000638959 FDX2Q6P4F2 183 aa3.5□□□□□ -1.85
LMBR1-222ENST00000638959 ZNF574Q6ZN55 896 aaPredicted RBP3.5□□□□□ -1.85
LMBR1-222ENST00000638959 UBASH3BQ8TF42 649 aa3.5□□□□□ -1.85
LMBR1-222ENST00000638959 IFT43Q96FT9 208 aa3.5□□□□□ -1.85
LMBR1-222ENST00000638959 PPP1R16BQ96T49 567 aa3.5□□□□□ -1.85
LMBR1-222ENST00000638959 CARD10Q9BWT7 1032 aa3.5□□□□□ -1.85
LMBR1-222ENST00000638959 RC3H2Q9HBD1 1191 aaKnown RBP3.5□□□□□ -1.85
LMBR1-222ENST00000638959 SASH3O75995 380 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 CDC25BP30305 580 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 GTF2IP78347 998 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 RTN1Q16799 776 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 SGO2Q562F6 1265 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 GLIS3Q8NEA6 775 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 NSUN5Q96P11 429 aaKnown RBP3.49□□□□□ -1.85
LMBR1-222ENST00000638959 FAM117AQ9C073 453 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 TSPAN10Q9H1Z9 355 aaPredicted RBP3.49□□□□□ -1.85
LMBR1-222ENST00000638959 SLC24A3Q9HC58 644 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 SLC5A6Q9Y289 635 aa3.49□□□□□ -1.85
LMBR1-222ENST00000638959 LOC102724428A0A0B4J2F2 783 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 SIK1P57059 783 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 MLANAQ16655 118 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 EML3Q32P44 896 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 IER5Q5VY09 327 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 ALDH16A1Q8IZ83 802 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 SHISA5Q8N114 240 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 CACTIN-AS1Q8N1I8 211 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 FOXD4L4Q8WXT5 416 aaPredicted RBP3.48□□□□□ -1.85
LMBR1-222ENST00000638959 NGLY1Q96IV0 654 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 LRRC4CQ9HCJ2 640 aa3.48□□□□□ -1.85
LMBR1-222ENST00000638959 TGFBR3LH3BV60 316 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 APBB1O00213 710 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 DDX3YO15523 660 aaKnown RBP3.47□□□□□ -1.85
LMBR1-222ENST00000638959 NFKBIBQ15653 356 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 POTEAQ6S8J7 498 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 KLHL23Q8NBE8 558 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 RELTQ969Z4 430 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 TBC1D32Q96NH3 1257 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 RNF208Q9H0X6 261 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 TLR7Q9NYK1 1049 aaKnown RBP3.47□□□□□ -1.85
LMBR1-222ENST00000638959 ZC3H7BQ9UGR2 993 aaKnown RBP3.47□□□□□ -1.85
LMBR1-222ENST00000638959 NOD1Q9Y239 953 aa3.47□□□□□ -1.85
LMBR1-222ENST00000638959 FSCN2O14926 492 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 ADAM11O75078 769 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 PSAPP07602 524 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 FAM117BQ6P1L5 589 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 PAOXQ6QHF9 649 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 BCL7CQ8WUZ0 217 aaPredicted RBP3.46□□□□□ -1.86
LMBR1-222ENST00000638959 LACRTQ9GZZ8 138 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 ADAM19Q9H013 955 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 FAM53CQ9NYF3 392 aa3.46□□□□□ -1.86
LMBR1-222ENST00000638959 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.46□□□□□ -1.86
LMBR1-222ENST00000638959 FAM95CA0A1B0GW59 222 aa3.45□□□□□ -1.86
LMBR1-222ENST00000638959 PPP1R12BO60237 982 aaPredicted RBP3.45□□□□□ -1.86
LMBR1-222ENST00000638959 RNASE1P07998 156 aaKnown RBP3.45□□□□□ -1.86
LMBR1-222ENST00000638959 IDH3AP50213 366 aa3.45□□□□□ -1.86
LMBR1-222ENST00000638959 CRTC2Q53ET0 693 aaPredicted RBP3.45□□□□□ -1.86
LMBR1-222ENST00000638959 SYDE1Q6ZW31 735 aaPredicted RBP3.45□□□□□ -1.86
LMBR1-222ENST00000638959 STK11IPQ8N1F8 1099 aa3.45□□□□□ -1.86
LMBR1-222ENST00000638959 MTMR14Q8NCE2 650 aa3.45□□□□□ -1.86
LMBR1-222ENST00000638959 PCMTD1Q96MG8 357 aaPredicted RBP3.45□□□□□ -1.86
LMBR1-222ENST00000638959 RUSC1Q9BVN2 902 aa3.45□□□□□ -1.86
LMBR1-222ENST00000638959 TMPRSS5Q9H3S3 457 aa3.45□□□□□ -1.86
LMBR1-222ENST00000638959 MEGF11A6BM72 1044 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 FAM170BA6NMN3 283 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 TM4SF5O14894 197 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 HOXA5P20719 270 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 ADMP35318 185 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 DUSP27Q5VZP5 1158 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 SPRED2Q7Z698 418 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 ZAR1Q86SH2 424 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 WFDC3Q8IUB2 231 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 C20orf173Q96LM9 149 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 KDM4CQ9H3R0 1056 aa3.44□□□□□ -1.86
LMBR1-222ENST00000638959 GPBP1L1Q9HC44 474 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 2450 ms