RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 RTL9Q8NET4 1388 aa21.72■■□□□ 1.07
SMN2-216ENST00000638794 MYH3P11055 1940 aa21.71■■□□□ 1.07
SMN2-216ENST00000638794 CELF2O95319 508 aaKnown RBP21.71■■□□□ 1.07
SMN2-216ENST00000638794 CYP4F22Q6NT55 531 aa21.71■■□□□ 1.07
SMN2-216ENST00000638794 DPF2Q92785 391 aa21.71■■□□□ 1.07
SMN2-216ENST00000638794 KCNQ5Q9NR82 932 aa21.71■■□□□ 1.07
SMN2-216ENST00000638794 PODXL2Q9NZ53 605 aa21.71■■□□□ 1.07
SMN2-216ENST00000638794 PI4KAP2A4QPH2 592 aa21.7■■□□□ 1.06
SMN2-216ENST00000638794 ECE1P42892 770 aa21.7■■□□□ 1.06
SMN2-216ENST00000638794 GRM1Q13255 1194 aa21.7■■□□□ 1.06
SMN2-216ENST00000638794 KSR2Q6VAB6 950 aa21.7■■□□□ 1.06
SMN2-216ENST00000638794 WWC1Q8IX03 1113 aa21.7■■□□□ 1.06
SMN2-216ENST00000638794 PI4KAP1Q8N8J0 262 aa21.7■■□□□ 1.06
SMN2-216ENST00000638794 UFL1O94874 794 aa21.69■■□□□ 1.06
SMN2-216ENST00000638794 IGKV5-2P06315 115 aa21.69■■□□□ 1.06
SMN2-216ENST00000638794 MAP2K1Q02750 393 aaPredicted RBP21.69■■□□□ 1.06
SMN2-216ENST00000638794 SAMD7Q7Z3H4 446 aa21.69■■□□□ 1.06
SMN2-216ENST00000638794 STK31Q9BXU1 1019 aa21.69■■□□□ 1.06
SMN2-216ENST00000638794 ZC3H12CQ9C0D7 883 aaKnown RBP21.69■■□□□ 1.06
SMN2-216ENST00000638794 ANKIB1Q9P2G1 1089 aa21.69■■□□□ 1.06
SMN2-216ENST00000638794 SPEF2Q9C093 1822 aa21.69■■□□□ 1.06
SMN2-216ENST00000638794 POLR2AP24928 1970 aaKnown RBP21.68■■□□□ 1.06
SMN2-216ENST00000638794 LBX1P52954 281 aa21.68■■□□□ 1.06
SMN2-216ENST00000638794 CDC37L1Q7L3B6 337 aa21.68■■□□□ 1.06
SMN2-216ENST00000638794 SAPCD2Q86UD0 394 aa21.68■■□□□ 1.06
SMN2-216ENST00000638794 GGA1Q9UJY5 639 aa21.68■■□□□ 1.06
SMN2-216ENST00000638794 EGFRP00533 1210 aa21.67■■□□□ 1.06
SMN2-216ENST00000638794 HSPA8P11142 646 aaKnown RBP21.67■■□□□ 1.06
SMN2-216ENST00000638794 RPS12P25398 132 aaKnown RBP21.67■■□□□ 1.06
SMN2-216ENST00000638794 TWISTNBQ3B726 338 aaPredicted RBP21.67■■□□□ 1.06
SMN2-216ENST00000638794 ZNF408Q9H9D4 720 aa21.67■■□□□ 1.06
SMN2-216ENST00000638794 PSME4Q14997 1843 aa21.66■■□□□ 1.06
SMN2-216ENST00000638794 CTSWP56202 376 aa21.66■■□□□ 1.06
SMN2-216ENST00000638794 TBC1D10BQ4KMP7 808 aaPredicted RBP21.66■■□□□ 1.06
SMN2-216ENST00000638794 G2E3Q7L622 706 aa21.66■■□□□ 1.06
SMN2-216ENST00000638794 ANKRD18AQ8IVF6 992 aa21.66■■□□□ 1.06
SMN2-216ENST00000638794 IL16Q14005 1332 aa21.65■■□□□ 1.06
SMN2-216ENST00000638794 NEXNQ0ZGT2 675 aa21.65■■□□□ 1.06
SMN2-216ENST00000638794 CWF19L2Q2TBE0 894 aaKnown RBP21.65■■□□□ 1.06
SMN2-216ENST00000638794 USP48Q86UV5 1035 aa21.65■■□□□ 1.06
SMN2-216ENST00000638794 MRS2Q9HD23 443 aa21.65■■□□□ 1.06
SMN2-216ENST00000638794 XDHP47989 1333 aa21.64■■□□□ 1.05
SMN2-216ENST00000638794 AOC2O75106 756 aa21.64■■□□□ 1.05
SMN2-216ENST00000638794 VIL1P09327 827 aaKnown RBP21.64■■□□□ 1.05
SMN2-216ENST00000638794 DLK2Q6UY11 383 aa21.64■■□□□ 1.05
SMN2-216ENST00000638794 CACNA1FO60840 1977 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 NEURL1BA8MQ27 555 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 G3V3G9 751 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 NCBP3Q53F19 620 aaKnown RBP21.63■■□□□ 1.05
SMN2-216ENST00000638794 RBM26Q5T8P6 1007 aaKnown RBP21.63■■□□□ 1.05
SMN2-216ENST00000638794 DCAF8Q5TAQ9 597 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 TTLL11Q8NHH1 800 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 HHIPL1Q96JK4 782 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 CDC5LQ99459 802 aaKnown RBP21.63■■□□□ 1.05
SMN2-216ENST00000638794 GREM2Q9H772 168 aa21.63■■□□□ 1.05
SMN2-216ENST00000638794 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
SMN2-216ENST00000638794 KRT26Q7Z3Y9 468 aa21.62■■□□□ 1.05
SMN2-216ENST00000638794 MAP2K2P36507 400 aa21.61■■□□□ 1.05
SMN2-216ENST00000638794 KIF4BQ2VIQ3 1234 aa21.61■■□□□ 1.05
SMN2-216ENST00000638794 UBE3BQ7Z3V4 1068 aa21.61■■□□□ 1.05
SMN2-216ENST00000638794 BEGAINQ9BUH8 593 aa21.61■■□□□ 1.05
SMN2-216ENST00000638794 ZNF609O15014 1411 aa21.61■■□□□ 1.05
SMN2-216ENST00000638794 ATP2B4P23634 1241 aa21.6■■□□□ 1.05
SMN2-216ENST00000638794 FLIIQ13045 1269 aa21.6■■□□□ 1.05
SMN2-216ENST00000638794 WTIPA6NIX2 430 aaPredicted RBP21.59■■□□□ 1.05
SMN2-216ENST00000638794 ADM5C9JUS6 153 aa21.59■■□□□ 1.05
SMN2-216ENST00000638794 H7C1W4 665 aa21.59■■□□□ 1.05
SMN2-216ENST00000638794 RSBN1LQ6PCB5 846 aaPredicted RBP21.59■■□□□ 1.05
SMN2-216ENST00000638794 DCPSQ96C86 337 aaKnown RBP21.59■■□□□ 1.05
SMN2-216ENST00000638794 BSDC1Q9NW68 430 aaPredicted RBP21.59■■□□□ 1.05
SMN2-216ENST00000638794 MINPP1Q9UNW1 487 aa21.59■■□□□ 1.05
SMN2-216ENST00000638794 SALL2Q9Y467 1007 aaPredicted RBP21.59■■□□□ 1.05
SMN2-216ENST00000638794 ANP32CO43423 234 aa21.58■■□□□ 1.05
SMN2-216ENST00000638794 HUNKP57058 714 aa21.58■■□□□ 1.05
SMN2-216ENST00000638794 AGBL3Q8NEM8 1001 aa21.58■■□□□ 1.05
SMN2-216ENST00000638794 MED23Q9ULK4 1368 aa21.58■■□□□ 1.04
SMN2-216ENST00000638794 ASTN2O75129 1339 aaPredicted RBP21.57■■□□□ 1.04
SMN2-216ENST00000638794 ZNF646O15015 1829 aaPredicted RBP21.57■■□□□ 1.04
SMN2-216ENST00000638794 ZEB1P37275 1124 aaPredicted RBP21.57■■□□□ 1.04
SMN2-216ENST00000638794 ZNF280AP59817 542 aaPredicted RBP21.57■■□□□ 1.04
SMN2-216ENST00000638794 FKBP5Q13451 457 aaPredicted RBP21.57■■□□□ 1.04
SMN2-216ENST00000638794 GCKRQ14397 625 aa21.57■■□□□ 1.04
SMN2-216ENST00000638794 PODNQ7Z5L7 613 aa21.57■■□□□ 1.04
SMN2-216ENST00000638794 GGA3Q9NZ52 723 aa21.57■■□□□ 1.04
SMN2-216ENST00000638794 TSKSQ9UJT2 592 aa21.57■■□□□ 1.04
SMN2-216ENST00000638794 WDR63Q8IWG1 891 aa21.56■■□□□ 1.04
SMN2-216ENST00000638794 GMLQ99445 158 aa21.56■■□□□ 1.04
SMN2-216ENST00000638794 PLA2G12BQ9BX93 195 aa21.56■■□□□ 1.04
SMN2-216ENST00000638794 USP17L3A6NCW0 530 aa21.55■■□□□ 1.04
SMN2-216ENST00000638794 USP17L4A6NCW7 530 aa21.55■■□□□ 1.04
SMN2-216ENST00000638794 VAMP4O75379 141 aa21.55■■□□□ 1.04
SMN2-216ENST00000638794 CCT4P50991 539 aaKnown RBP21.55■■□□□ 1.04
SMN2-216ENST00000638794 BRPF1P55201 1214 aaPredicted RBP21.55■■□□□ 1.04
SMN2-216ENST00000638794 CASP7P55210 303 aa21.55■■□□□ 1.04
SMN2-216ENST00000638794 EXOSC9Q06265 439 aaKnown RBP21.55■■□□□ 1.04
SMN2-216ENST00000638794 USP17L1Q7RTZ2 530 aa21.55■■□□□ 1.04
SMN2-216ENST00000638794 DNAAF4Q8WXU2 420 aa21.55■■□□□ 1.04
SMN2-216ENST00000638794 GBA2Q9HCG7 927 aaPredicted RBP21.55■■□□□ 1.04
SMN2-216ENST00000638794 ZNF316A6NFI3 1004 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms