RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 ZSCAN25Q6NSZ9 544 aa8.35□□□□□ -1.07
GABRB3-221ENST00000636690 TTLL7Q6ZT98 887 aa8.35□□□□□ -1.07
GABRB3-221ENST00000636690 ZNF589Q86UQ0 364 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-221ENST00000636690 DBNDD2Q9BQY9 259 aa8.35□□□□□ -1.07
GABRB3-221ENST00000636690 TSPY26PQ9H489 355 aa8.35□□□□□ -1.07
GABRB3-221ENST00000636690 ZSCAN16Q9H4T2 348 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-221ENST00000636690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
GABRB3-221ENST00000636690 ITGB4P16144 1822 aa8.35□□□□□ -1.07
GABRB3-221ENST00000636690 ZMYM6O95789 1325 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 RREB1Q92766 1687 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 RNF113AO15541 343 aaKnown RBP8.34□□□□□ -1.07
GABRB3-221ENST00000636690 CAVIN2O95810 425 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 A1BGP04217 495 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 IL6STP40189 918 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-221ENST00000636690 PRIM1P49642 420 aaKnown RBP8.34□□□□□ -1.07
GABRB3-221ENST00000636690 EVCP57679 992 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 IFIT5Q13325 482 aaKnown RBP8.34□□□□□ -1.07
GABRB3-221ENST00000636690 TOB2Q14106 344 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-221ENST00000636690 TTF1Q15361 905 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-221ENST00000636690 DHX32Q7L7V1 743 aaKnown RBP8.34□□□□□ -1.07
GABRB3-221ENST00000636690 USP48Q86UV5 1035 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 ZSCAN30Q86W11 494 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 CCDC83Q8IWF9 413 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 KLHDC4Q8TBB5 520 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 PIGBQ92521 554 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 GTF3C6Q969F1 213 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 TPCN1Q9ULQ1 816 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 CARMIL3Q8ND23 1372 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 RTL9Q8NET4 1388 aa8.34□□□□□ -1.07
GABRB3-221ENST00000636690 COL16A1Q07092 1604 aaPredicted RBP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 MYH3P11055 1940 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 KDM4FA0A1W2PPD8 638 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 PFKFB2O60825 505 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 IFIT1P09914 478 aaKnown RBP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 TERF1P54274 439 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 ST3GAL1Q11201 340 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 NAA16Q6N069 864 aaPredicted RBP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 NOL8Q76FK4 1167 aaKnown RBP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 SMARCC2Q8TAQ2 1214 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 ZNF274Q96GC6 653 aaPredicted RBP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.33□□□□□ -1.08
GABRB3-221ENST00000636690 ZBTB3Q9H5J0 574 aa8.33□□□□□ -1.08
GABRB3-221ENST00000636690 ARAP2Q8WZ64 1704 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 NWD2Q9ULI1 1742 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 SYCE3A1L190 88 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 EXOC5O00471 708 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 LARGE1O95461 756 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 CYP21A2P08686 494 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
GABRB3-221ENST00000636690 EXOSC10Q01780 885 aaKnown RBP8.32□□□□□ -1.08
GABRB3-221ENST00000636690 APPBP2Q92624 585 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
GABRB3-221ENST00000636690 RBSNQ9H1K0 784 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 STRN4Q9NRL3 753 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 DDX19AQ9NUU7 478 aaKnown RBP8.32□□□□□ -1.08
GABRB3-221ENST00000636690 CCDC39Q9UFE4 941 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 CFAP45Q9UL16 551 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 NOL7Q9UMY1 257 aaKnown RBP8.32□□□□□ -1.08
GABRB3-221ENST00000636690 CHMP3Q9Y3E7 222 aa8.32□□□□□ -1.08
GABRB3-221ENST00000636690 MROH5Q6ZUA9 1318 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 ROBO1Q9Y6N7 1651 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 RIC1Q4ADV7 1423 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 ANKRD18BA2A2Z9 1011 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 GOLIM4O00461 696 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 DHX16O60231 1041 aaKnown RBP8.31□□□□□ -1.08
GABRB3-221ENST00000636690 PDE8AO60658 829 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 IGSF3O75054 1194 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 UQCRFS1P1P0C7P4 283 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 HSPD1P10809 573 aaKnown RBP8.31□□□□□ -1.08
GABRB3-221ENST00000636690 CTSWP56202 376 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 PARP10Q53GL7 1025 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 TAF7LQ5H9L4 462 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 TTC39AQ5SRH9 613 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 TMED8Q6PL24 325 aaPredicted RBP8.31□□□□□ -1.08
GABRB3-221ENST00000636690 NLRP10Q86W26 655 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 DNAJC10Q8IXB1 793 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 NEUROD6Q96NK8 337 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 MTA3Q9BTC8 594 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 RRAGDQ9NQL2 400 aaPredicted RBP8.31□□□□□ -1.08
GABRB3-221ENST00000636690 BTG4Q9NY30 223 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 RIPOR2Q9Y4F9 1068 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 NRAPQ86VF7 1730 aa8.31□□□□□ -1.08
GABRB3-221ENST00000636690 MAST3O60307 1309 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 SALL1Q9NSC2 1324 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 LAMB2P55268 1798 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 ZNF500O60304 480 aaPredicted RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 TPM3P06753 285 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 CPA1P15085 419 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 MSNP26038 577 aaKnown RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 PIP4K2AP48426 406 aaPredicted RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 UBE3CQ15386 1083 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 ATP2B3Q16720 1220 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 IMMTQ16891 758 aaKnown RBP8.3□□□□□ -1.08
GABRB3-221ENST00000636690 LRRC24Q50LG9 513 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 GORABQ5T7V8 394 aa8.3□□□□□ -1.08
GABRB3-221ENST00000636690 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms