RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLN5-213ENST00000636681 CNNM1Q9NRU3 951 aa13.2□□□□□ -0.3
CLN5-213ENST00000636681 TLR7Q9NYK1 1049 aaKnown RBP13.2□□□□□ -0.3
CLN5-213ENST00000636681 KCNA3P22001 575 aa13.19□□□□□ -0.3
CLN5-213ENST00000636681 PDE6BP35913 854 aa13.19□□□□□ -0.3
CLN5-213ENST00000636681 RGS3P49796 1198 aa13.19□□□□□ -0.3
CLN5-213ENST00000636681 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
CLN5-213ENST00000636681 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
CLN5-213ENST00000636681 ANKRD18AQ8IVF6 992 aa13.19□□□□□ -0.3
CLN5-213ENST00000636681 NLGN2Q8NFZ4 835 aa13.19□□□□□ -0.3
CLN5-213ENST00000636681 HSP90B1P14625 803 aaKnown RBP13.18□□□□□ -0.3
CLN5-213ENST00000636681 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
CLN5-213ENST00000636681 GRAPQ13588 217 aa13.18□□□□□ -0.3
CLN5-213ENST00000636681 GRAPLQ8TC17 118 aaPredicted RBP13.18□□□□□ -0.3
CLN5-213ENST00000636681 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
CLN5-213ENST00000636681 MPHOSPH8Q99549 860 aa13.18□□□□□ -0.3
CLN5-213ENST00000636681 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
CLN5-213ENST00000636681 SPON1Q9HCB6 807 aa13.18□□□□□ -0.3
CLN5-213ENST00000636681 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
CLN5-213ENST00000636681 H0YIN7 160 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
CLN5-213ENST00000636681 TIMM10P62072 90 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 CHRNDQ07001 517 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 VGLL2Q8N8G2 317 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
CLN5-213ENST00000636681 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
CLN5-213ENST00000636681 CDC5LQ99459 802 aaKnown RBP13.17□□□□□ -0.3
CLN5-213ENST00000636681 CCDC8Q9H0W5 538 aaPredicted RBP13.17□□□□□ -0.3
CLN5-213ENST00000636681 NPR1P16066 1061 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
CLN5-213ENST00000636681 LTBP1Q14766 1721 aa13.16□□□□□ -0.3
CLN5-213ENST00000636681 CIAO1O76071 339 aa13.16□□□□□ -0.3
CLN5-213ENST00000636681 ADORA1P30542 326 aa13.16□□□□□ -0.3
CLN5-213ENST00000636681 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
CLN5-213ENST00000636681 MASTLQ96GX5 879 aa13.16□□□□□ -0.3
CLN5-213ENST00000636681 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
CLN5-213ENST00000636681 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
CLN5-213ENST00000636681 MYO5AQ9Y4I1 1855 aaKnown RBP13.16□□□□□ -0.3
CLN5-213ENST00000636681 ARAP2Q8WZ64 1704 aa13.16□□□□□ -0.3
CLN5-213ENST00000636681 RAB11FIP3O75154 756 aa13.15□□□□□ -0.3
CLN5-213ENST00000636681 KLRK1P26718 216 aa13.15□□□□□ -0.3
CLN5-213ENST00000636681 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
CLN5-213ENST00000636681 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
CLN5-213ENST00000636681 ZNF609O15014 1411 aa13.15□□□□□ -0.3
CLN5-213ENST00000636681 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
CLN5-213ENST00000636681 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.31
CLN5-213ENST00000636681 GPSM2P81274 684 aa13.15□□□□□ -0.31
CLN5-213ENST00000636681 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.31
CLN5-213ENST00000636681 AACSQ86V21 672 aa13.15□□□□□ -0.31
CLN5-213ENST00000636681 DBNDD2Q9BQY9 259 aa13.15□□□□□ -0.31
CLN5-213ENST00000636681 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.31
CLN5-213ENST00000636681 CEP126Q9P2H0 1117 aa13.15□□□□□ -0.31
CLN5-213ENST00000636681 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
CLN5-213ENST00000636681 NEUROD6Q96NK8 337 aa13.14□□□□□ -0.31
CLN5-213ENST00000636681 DBNLQ9UJU6 430 aaKnown RBP13.14□□□□□ -0.31
CLN5-213ENST00000636681 CHD4Q14839 1912 aa13.14□□□□□ -0.31
CLN5-213ENST00000636681 DUOX1Q9NRD9 1551 aa13.14□□□□□ -0.31
CLN5-213ENST00000636681 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
CLN5-213ENST00000636681 PDE8BO95263 885 aa13.13□□□□□ -0.31
CLN5-213ENST00000636681 STYK1Q6J9G0 422 aa13.13□□□□□ -0.31
CLN5-213ENST00000636681 PLEKHM2Q8IWE5 1019 aa13.13□□□□□ -0.31
CLN5-213ENST00000636681 NDUFB9Q9Y6M9 179 aa13.13□□□□□ -0.31
CLN5-213ENST00000636681 AKAP11Q9UKA4 1901 aa13.13□□□□□ -0.31
CLN5-213ENST00000636681 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
CLN5-213ENST00000636681 C21orf2O43822 256 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 AK9Q5TCS8 1911 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 BBOX1O75936 387 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 FGFR2P21802 821 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 CLASRPQ8N2M8 674 aaKnown RBP13.12□□□□□ -0.31
CLN5-213ENST00000636681 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
CLN5-213ENST00000636681 NSFL1CQ9UNZ2 370 aaKnown RBP13.12□□□□□ -0.31
CLN5-213ENST00000636681 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
CLN5-213ENST00000636681 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
CLN5-213ENST00000636681 ALDH1B1P30837 517 aa13.11□□□□□ -0.31
CLN5-213ENST00000636681 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
CLN5-213ENST00000636681 POLLQ9UGP5 575 aa13.11□□□□□ -0.31
CLN5-213ENST00000636681 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
CLN5-213ENST00000636681 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
CLN5-213ENST00000636681 IFIT2P09913 472 aaKnown RBP13.1□□□□□ -0.31
CLN5-213ENST00000636681 PDE1AP54750 535 aa13.1□□□□□ -0.31
CLN5-213ENST00000636681 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
CLN5-213ENST00000636681 TTLL6Q8N841 843 aa13.1□□□□□ -0.31
CLN5-213ENST00000636681 XAGE2Q96GT9 111 aa13.1□□□□□ -0.31
CLN5-213ENST00000636681 ANKIB1Q9P2G1 1089 aa13.1□□□□□ -0.31
CLN5-213ENST00000636681 ZBTB47Q9UFB7 747 aaPredicted RBP13.1□□□□□ -0.31
CLN5-213ENST00000636681 IQSEC3Q9UPP2 1182 aaPredicted RBP13.1□□□□□ -0.31
CLN5-213ENST00000636681 SNED1Q8TER0 1413 aa13.1□□□□□ -0.31
CLN5-213ENST00000636681 FER1L6Q2WGJ9 1857 aa13.1□□□□□ -0.31
CLN5-213ENST00000636681 PHKA1P46020 1223 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 GYG1P46976 350 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 TGFB2P61812 414 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 SCARF1Q14162 830 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 PI16Q6UXB8 463 aa13.09□□□□□ -0.31
CLN5-213ENST00000636681 CNKSR1Q969H4 720 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms