RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 ITGA6P23229 1130 aa14.05□□□□□ -0.16
SRP54-AS1-205ENST00000636540 POLLQ9UGP5 575 aa14.05□□□□□ -0.16
SRP54-AS1-205ENST00000636540 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
SRP54-AS1-205ENST00000636540 VEGFAP15692 232 aaPredicted RBP14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 EPHA10Q5JZY3 1008 aa14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 C16orf71Q8IYS4 520 aaPredicted RBP14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 GPC2Q8N158 579 aa14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 TBC1D16Q8TBP0 767 aa14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 RBM46Q8TBY0 533 aaKnown RBP14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 SUCLG2Q96I99 432 aa14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 BSDC1Q9NW68 430 aaPredicted RBP14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 C9orf78Q9NZ63 289 aaPredicted RBP14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 XDHP47989 1333 aa14.04□□□□□ -0.16
SRP54-AS1-205ENST00000636540 CAPN15O75808 1086 aa14.03□□□□□ -0.16
SRP54-AS1-205ENST00000636540 UFL1O94874 794 aa14.03□□□□□ -0.16
SRP54-AS1-205ENST00000636540 NBPF7P0C2Y1 421 aaPredicted RBP14.03□□□□□ -0.16
SRP54-AS1-205ENST00000636540 EIF6P56537 245 aaKnown RBP14.03□□□□□ -0.16
SRP54-AS1-205ENST00000636540 KAZALD1Q96I82 304 aa14.03□□□□□ -0.16
SRP54-AS1-205ENST00000636540 GPR101Q96P66 508 aaPredicted RBP14.03□□□□□ -0.16
SRP54-AS1-205ENST00000636540 NOB1Q9ULX3 412 aaKnown RBP14.03□□□□□ -0.16
SRP54-AS1-205ENST00000636540 MED23Q9ULK4 1368 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 IQCA1LA6NCM1 817 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 YDJCA8MPS7 323 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 C6orf229H3BNL8 230 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 WASHC4Q2M389 1173 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 EYA3Q99504 573 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 API5Q9BZZ5 524 aaKnown RBP14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ANKIB1Q9P2G1 1089 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 GGA1Q9UJY5 639 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ZNRF3Q9ULT6 936 aa14.02□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ARAP2Q8WZ64 1704 aa14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ZNF609O15014 1411 aa14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ANKRD18BA2A2Z9 1011 aa14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 SCNN1DP51172 638 aa14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 IFIT5Q13325 482 aaKnown RBP14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 RABL6Q3YEC7 729 aaPredicted RBP14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 LMBR1LQ6UX01 489 aa14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 BICC1Q9H694 974 aaKnown RBP14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 MINPP1Q9UNW1 487 aa14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 CEP350Q5VT06 3117 aa14.01□□□□□ -0.17
SRP54-AS1-205ENST00000636540 CCT4P50991 539 aaKnown RBP14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 CXCL9Q07325 125 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 FSTL1Q12841 308 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ANKRD44Q8N8A2 993 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ARHGAP45Q92619 1136 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 USP44Q9H0E7 712 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 TAF1DQ9H5J8 278 aaPredicted RBP14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 DBNDD1Q9H9R9 158 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 CHMP3Q9Y3E7 222 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 GJA3Q9Y6H8 435 aa14□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ECE2O60344 883 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 BCAR3O75815 825 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 TRIM27P14373 513 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ATP2B4P23634 1241 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 MPHOSPH8Q99549 860 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 HACL1Q9UJ83 578 aa13.99□□□□□ -0.17
SRP54-AS1-205ENST00000636540 RIMBP2O15034 1052 aa13.98□□□□□ -0.17
SRP54-AS1-205ENST00000636540 RAD17O75943 681 aa13.98□□□□□ -0.17
SRP54-AS1-205ENST00000636540 HSPA6P17066 643 aa13.98□□□□□ -0.17
SRP54-AS1-205ENST00000636540 EPHX2P34913 555 aa13.98□□□□□ -0.17
SRP54-AS1-205ENST00000636540 CHRNDQ07001 517 aa13.98□□□□□ -0.17
SRP54-AS1-205ENST00000636540 CCDC57Q2TAC2 916 aa13.98□□□□□ -0.17
SRP54-AS1-205ENST00000636540 CIAPIN1Q6FI81 312 aa13.98□□□□□ -0.17
SRP54-AS1-205ENST00000636540 WTIPA6NIX2 430 aaPredicted RBP13.97□□□□□ -0.17
SRP54-AS1-205ENST00000636540 INTS3Q68E01 1043 aaKnown RBP13.97□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ZNF594Q96JF6 807 aaPredicted RBP13.97□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ANKRD2Q9GZV1 360 aa13.97□□□□□ -0.17
SRP54-AS1-205ENST00000636540 TNNQ9UQP3 1299 aa13.97□□□□□ -0.17
SRP54-AS1-205ENST00000636540 IRS2Q9Y4H2 1338 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 PSMD14O00487 310 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 KLRK1P26718 216 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 GMPSP49915 693 aaPredicted RBP13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 TNIP1Q15025 636 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 DOK7Q18PE1 504 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 TAF7LQ5H9L4 462 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 LDHDQ86WU2 507 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 ZC3H12CQ9C0D7 883 aaKnown RBP13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 GPRC5DQ9NZD1 345 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 LEMD3Q9Y2U8 911 aa13.96□□□□□ -0.17
SRP54-AS1-205ENST00000636540 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.18
SRP54-AS1-205ENST00000636540 TRPM7Q96QT4 1865 aa13.95□□□□□ -0.18
SRP54-AS1-205ENST00000636540 ZNF804BA4D1E1 1349 aa13.95□□□□□ -0.18
SRP54-AS1-205ENST00000636540 IPO8O15397 1037 aaKnown RBP13.95□□□□□ -0.18
SRP54-AS1-205ENST00000636540 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
SRP54-AS1-205ENST00000636540 EPS15P42566 896 aa13.95□□□□□ -0.18
SRP54-AS1-205ENST00000636540 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
SRP54-AS1-205ENST00000636540 MEIS3Q99687 375 aa13.95□□□□□ -0.18
SRP54-AS1-205ENST00000636540 EAPPQ56P03 285 aaPredicted RBP13.94□□□□□ -0.18
SRP54-AS1-205ENST00000636540 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
SRP54-AS1-205ENST00000636540 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
SRP54-AS1-205ENST00000636540 PNMA8AQ86V59 439 aaPredicted RBP13.94□□□□□ -0.18
SRP54-AS1-205ENST00000636540 TXNRD3Q86VQ6 643 aa13.94□□□□□ -0.18
SRP54-AS1-205ENST00000636540 KCNQ5Q9NR82 932 aa13.94□□□□□ -0.18
SRP54-AS1-205ENST00000636540 ZKSCAN2Q63HK3 967 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms