RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 RNF217Q8TC41 542 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 PI4K2BQ8TCG2 481 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 WIPF2Q8TF74 440 aaPredicted RBP-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 NR4A3Q92570 626 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 TATDN2Q93075 761 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 ZBTB9Q96C00 473 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 MS4A4AQ96JQ5 239 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 SLC26A8Q96RN1 970 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 BRINP2Q9C0B6 783 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 NUCKS1Q9H1E3 243 aaKnown RBP-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 CYLDQ9NQC7 956 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 PRDM9Q9NQV7 894 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 PRDM6Q9NQX0 595 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 TSKSQ9UJT2 592 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 EMILIN1Q9Y6C2 1016 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 FAT4Q6V0I7 4981 aa-0.3□□□□□ -2.46
CDKL5-210ENST00000636046 ZNF469Q96JG9 3925 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 CCDC187A0A096LP49 1063 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 DLL1O00548 723 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 IRS4O14654 1257 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 CYP26A1O43174 497 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 ALX3O95076 343 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 KRTAP1-4P0C5Y4 121 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 SRFP11831 508 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 RHOQP17081 205 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 FECHP22830 423 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 MLLT6P55198 1093 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 CTBSQ01459 385 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 VMACQ2NL98 169 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 KMT5BQ4FZB7 885 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 SWT1Q5T5J6 900 aaKnown RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 GFI1BQ5VTD9 330 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 FYB2Q5VWT5 728 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 IGFL4Q6B9Z1 124 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 MRGPRGQ86SM5 289 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 FMR1NBQ8N0W7 255 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 STK11IPQ8N1F8 1099 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 FIBCD1Q8N539 461 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 BCL7CQ8WUZ0 217 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 NEU4Q8WWR8 484 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 TAF15Q92804 592 aaKnown RBP eCLIP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 MFSD14AQ96MC6 490 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 CDK5RAP1Q96SZ6 601 aaKnown RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 RBM15Q96T37 977 aaKnown RBP eCLIP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 GAS2L1Q99501 681 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 OSBPL1AQ9BXW6 950 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 SLC29A3Q9BZD2 475 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 PLA2G12AQ9BZM1 189 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 ADAM19Q9H013 955 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 AKTIPQ9H8T0 292 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 POLMQ9NP87 494 aaPredicted RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 MRPS18AQ9NVS2 196 aaKnown RBP-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 MTMR4Q9NYA4 1195 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 COL7A1Q02388 2944 aa-0.31□□□□□ -2.46
CDKL5-210ENST00000636046 IGKV6D-21A0A0A0MT36 114 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 MYADML2A6NDP7 307 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 NBPF26B4DH59 902 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 RAMP2O60895 175 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ALBP02768 609 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 NR3C2P08235 984 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 GLB1P16278 677 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 FGFR3P22607 806 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ADRA1BP35368 520 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 MCAMP43121 646 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 AFMP43652 599 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 DLG4P78352 724 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 MVKQ03426 396 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 SSPNQ14714 243 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ARID5BQ14865 1188 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 C6orf132Q5T0Z8 1188 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 RBM26Q5T8P6 1007 aaKnown RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 HEATR6Q6AI08 1181 aaKnown RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 IGF2-ASQ6U949 168 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 PCSK4Q6UW60 755 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 LYSMD3Q7Z3D4 306 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 HDGFL2Q7Z4V5 671 aaPredicted RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 PRIMA1Q86XR5 153 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 WFDC3Q8IUB2 231 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 REXO1Q8N1G1 1221 aaKnown RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ZNF513Q8N8E2 541 aaPredicted RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 BMPERQ8N8U9 685 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ZNF592Q92610 1267 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 FBXW7Q969H0 707 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 KIRREL1Q96J84 757 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 UHRF2Q96PU4 802 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 TMEM209Q96SK2 561 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ZIC5Q96T25 663 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 EYA1Q99502 592 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 WACQ9BTA9 647 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 SRCIN1Q9C0H9 1055 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 DISC1Q9NRI5 854 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ZNF275Q9NSD4 429 aaPredicted RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 USP40Q9NVE5 1235 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 DKK2Q9UBU2 259 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 ST6GALNAC2Q9UJ37 374 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 RALYQ9UKM9 306 aaKnown RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 DYRK1BQ9Y463 629 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 SALL2Q9Y467 1007 aaPredicted RBP-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 MAST4O15021 2626 aa-0.32□□□□□ -2.46
CDKL5-210ENST00000636046 KMT2CQ8NEZ4 4911 aaKnown RBP-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms