RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-228	ENST00000635853	ECM2	O94769	699 aa	Predicted RBP	11.2	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SYT1	P21579	422 aa		11.2	□□□□□ -0.62
SPTAN1-228	ENST00000635853	USP26	Q9BXU7	913 aa		11.2	□□□□□ -0.62
SPTAN1-228	ENST00000635853	HDAC9	Q9UKV0	1011 aa		11.2	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ABCC11	Q96J66	1382 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	RBBP5	Q15291	538 aa	Known RBP	11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	TDRD12	Q587J7	1177 aa	Known RBP	11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	DDX46	Q7L014	1031 aa	Known RBP	11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ANKRD7	Q92527	254 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SPTLC3	Q9NUV7	552 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	RAD54L2	Q9Y4B4	1467 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853		A0A087WUV0	522 aa	Predicted RBP	11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CEP120	Q8N960	986 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	FBXO18	Q8NFZ0	1043 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	EXOC4	Q96A65	974 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CALML4	Q96GE6	196 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	IMPACT	Q9P2X3	320 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ARID4A	P29374	1257 aa	Predicted RBP	11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	BRD3	Q15059	726 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CATIP	Q7Z7H3	387 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	TAOK3	Q9H2K8	898 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	VAT1L	Q9HCJ6	419 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SLFNL1	Q499Z3	407 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SLC4A8	Q2Y0W8	1093 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	TCERG1L	Q5VWI1	586 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CCDC174	Q6PII3	467 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SUFU	Q9UMX1	484 aa		11.19	□□□□□ -0.62
SPTAN1-228	ENST00000635853	KIF5B	P33176	963 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SPATS2	Q86XZ4	545 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	RNF41	Q9H4P4	317 aa	Predicted RBP	11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	EXOC5	O00471	708 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	NOP2	P46087	812 aa	Known RBP	11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CCDC40	Q4G0X9	1142 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SPATA24	Q86W54	205 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	WDR66	Q8TBY9	1149 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	DACT1	Q9NYF0	836 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	PHACTR2	O75167	634 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ERCC3	P19447	782 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CARD6	Q9BX69	1037 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	MMRN2	Q9H8L6	949 aa		11.18	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CTAGE9	A4FU28	777 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	EFCAB8	A8MWE9	144 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	NEDD9	Q14511	834 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SREK1	Q8WXA9	508 aa	Known RBP	11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	TACO1	Q9BSH4	297 aa	Known RBP	11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ERCC6L	Q2NKX8	1250 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	PPP1R14C	Q8TAE6	165 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	USP19	O94966	1318 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	BAG3	O95817	575 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	LDHC	P07864	332 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SPECC1L	Q69YQ0	1117 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CCDC82	Q8N4S0	544 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	NUP88	Q99567	741 aa	Predicted RBP	11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	KAT14	Q9H8E8	782 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	GOLGA8A	A7E2F4	631 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	GOLGA8B	A8MQT2	603 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	USO1	O60763	962 aa	Known RBP	11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SATB1	Q01826	763 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	DNM1	Q05193	864 aa	Known RBP	11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	AOPEP	Q8N6M6	819 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CBX8	Q9HC52	389 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	NDC80	O14777	642 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SMARCA5	O60264	1052 aa	Predicted RBP	11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ZWINT	O95229	277 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	RLBP1	P12271	317 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CYP2C19	P33261	490 aa		11.17	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CCDC175	P0C221	793 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	POLD1	P28340	1107 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	AFAP1	Q8N556	730 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	FSIP1	Q8NA03	581 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CDC25B	P30305	580 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	AMPD3	Q01432	767 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	PLS1	Q14651	629 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ZNF213	O14771	459 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	BUB1B	O60566	1050 aa	Predicted RBP	11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	GADD45B	O75293	160 aa	Predicted RBP	11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	E2F4	Q16254	413 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	IKBKG	Q9Y6K9	419 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	HECW1	Q76N89	1606 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SH3BP5	O60239	455 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SDS	P20132	328 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	GSTO1	P78417	241 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	PRPF4B	Q13523	1007 aa	Known RBP	11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	MIPOL1	Q8TD10	442 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	SERPINA10	Q9UK55	444 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ATAD2B	Q9ULI0	1458 aa		11.16	□□□□□ -0.62
SPTAN1-228	ENST00000635853	TBCA	O75347	108 aa	Known RBP	11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	MTIF2	P46199	727 aa	Known RBP	11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	UBASH3A	P57075	661 aa		11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CAPN7	Q9Y6W3	813 aa		11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	IFIT3	O14879	490 aa	Known RBP	11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	PDE4B	Q07343	736 aa		11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	FAM71B	Q8TC56	605 aa		11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CDC5L	Q99459	802 aa	Known RBP	11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	GPT	P24298	496 aa		11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	EHBP1	Q8NDI1	1231 aa		11.15	□□□□□ -0.62
SPTAN1-228	ENST00000635853	CXorf56	Q9H5V9	222 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms