RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ZNF594Q96JF6 807 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-210ENST00000635675 MPHOSPH8Q99549 860 aa12.21□□□□□ -0.45
LINC00339-210ENST00000635675 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
LINC00339-210ENST00000635675 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.45
LINC00339-210ENST00000635675 XDHP47989 1333 aa12.21□□□□□ -0.46
LINC00339-210ENST00000635675 COL4A5P29400 1685 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 PLIN1O60240 522 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 MS4A1P11836 297 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 KIAA2012Q0VF49 1180 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 LARGE2Q8N3Y3 721 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 C6orf229H3BNL8 230 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 FZD9O00144 591 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-210ENST00000635675 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-210ENST00000635675 AOC3Q16853 763 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 WASHC4Q2M389 1173 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 LDHAL6AQ6ZMR3 332 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 JDP2Q8WYK2 163 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 ANKRD2Q9GZV1 360 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 GGA1Q9UJY5 639 aa12.2□□□□□ -0.46
LINC00339-210ENST00000635675 GLTPD2A6NH11 291 aa12.19□□□□□ -0.46
LINC00339-210ENST00000635675 WTIPA6NIX2 430 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-210ENST00000635675 CHRNDQ07001 517 aa12.19□□□□□ -0.46
LINC00339-210ENST00000635675 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
LINC00339-210ENST00000635675 ITPRIPQ8IWB1 547 aa12.19□□□□□ -0.46
LINC00339-210ENST00000635675 PUS3Q9BZE2 481 aaKnown RBP12.19□□□□□ -0.46
LINC00339-210ENST00000635675 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
LINC00339-210ENST00000635675 UFL1O94874 794 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 GNAI2P04899 355 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 ATP2B4P23634 1241 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 MTX1Q13505 466 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 ZNF526Q8TF50 670 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-210ENST00000635675 GPR101Q96P66 508 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-210ENST00000635675 EYA3Q99504 573 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 LEMD3Q9Y2U8 911 aa12.18□□□□□ -0.46
LINC00339-210ENST00000635675 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 RIMBP2O15034 1052 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 PTPN12Q05209 780 aaKnown RBP12.17□□□□□ -0.46
LINC00339-210ENST00000635675 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 C20orf194Q5TEA3 1177 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-210ENST00000635675 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-210ENST00000635675 KLHDC4Q8TBB5 520 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 ZC3H12CQ9C0D7 883 aaKnown RBP12.17□□□□□ -0.46
LINC00339-210ENST00000635675 GPBP1L1Q9HC44 474 aaPredicted RBP12.17□□□□□ -0.46
LINC00339-210ENST00000635675 CNNM1Q9NRU3 951 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 ZNRF3Q9ULT6 936 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 ZNF541Q9H0D2 1346 aa12.17□□□□□ -0.46
LINC00339-210ENST00000635675 TAF5LO75529 589 aa12.16□□□□□ -0.46
LINC00339-210ENST00000635675 DDNO94850 711 aaPredicted RBP12.16□□□□□ -0.46
LINC00339-210ENST00000635675 MVPQ14764 893 aaKnown RBP12.16□□□□□ -0.46
LINC00339-210ENST00000635675 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
LINC00339-210ENST00000635675 ZNF804BA4D1E1 1349 aa12.16□□□□□ -0.46
LINC00339-210ENST00000635675 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
LINC00339-210ENST00000635675 EIF6P56537 245 aaKnown RBP12.15□□□□□ -0.46
LINC00339-210ENST00000635675 CXCL9Q07325 125 aa12.15□□□□□ -0.46
LINC00339-210ENST00000635675 NMRK2Q9NPI5 230 aa12.15□□□□□ -0.46
LINC00339-210ENST00000635675 COPRSQ9NQ92 184 aa12.15□□□□□ -0.46
LINC00339-210ENST00000635675 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
LINC00339-210ENST00000635675 MROH5Q6ZUA9 1318 aa12.15□□□□□ -0.46
LINC00339-210ENST00000635675 A0A1B0GUL6 1792 aa12.15□□□□□ -0.46
LINC00339-210ENST00000635675 MED23Q9ULK4 1368 aa12.15□□□□□ -0.47
LINC00339-210ENST00000635675 POTECB2RU33 542 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 SNAP23O00161 211 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 EYA2O00167 538 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 SRGAP3O43295 1099 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 C15orf52Q6ZUT6 534 aaKnown RBP12.14□□□□□ -0.47
LINC00339-210ENST00000635675 ATG9AQ7Z3C6 839 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 TXNRD3Q86VQ6 643 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 GPC2Q8N158 579 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
LINC00339-210ENST00000635675 DBNDD1Q9H9R9 158 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 IRS2Q9Y4H2 1338 aa12.14□□□□□ -0.47
LINC00339-210ENST00000635675 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 KIF3CO14782 793 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 ECE2O60344 883 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 CIAO1O76071 339 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 KLRK1P26718 216 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 KCNJ4P48050 445 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 ATP8B2P98198 1209 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 C1orf115Q9H7X2 142 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 ZBTB40Q9NUA8 1239 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 WDR90Q96KV7 1748 aa12.13□□□□□ -0.47
LINC00339-210ENST00000635675 RAD17O75943 681 aa12.12□□□□□ -0.47
LINC00339-210ENST00000635675 PDE8BO95263 885 aa12.12□□□□□ -0.47
LINC00339-210ENST00000635675 VEGFAP15692 232 aaPredicted RBP12.12□□□□□ -0.47
LINC00339-210ENST00000635675 RRP1P56182 461 aaKnown RBP12.12□□□□□ -0.47
LINC00339-210ENST00000635675 UBE4AQ14139 1066 aa12.12□□□□□ -0.47
LINC00339-210ENST00000635675 METTL24Q5JXM2 366 aa12.12□□□□□ -0.47
LINC00339-210ENST00000635675 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms