RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	ATP1A2	P50993	1020 aa		5.27	□□□□□ -1.57
SMARCB1-208	ENST00000634926	HIF1A	Q16665	826 aa		5.27	□□□□□ -1.57
SMARCB1-208	ENST00000634926	POM121	Q96HA1	1249 aa		5.27	□□□□□ -1.57
SMARCB1-208	ENST00000634926	DBNDD2	Q9BQY9	259 aa		5.27	□□□□□ -1.57
SMARCB1-208	ENST00000634926	LINC01387	J3KSC0	135 aa		5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	DDX3Y	O15523	660 aa	Known RBP	5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	DGKZ	Q13574	1117 aa		5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	ACAD11	Q709F0	780 aa		5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	CBLL1	Q75N03	491 aa		5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	SHISA5	Q8N114	240 aa		5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	UTP4	Q969X6	686 aa	Known RBP	5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	MYRFL	Q96LU7	910 aa		5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	KRTAP17-1	Q9BYP8	105 aa		5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	QTRT2	Q9H974	415 aa	Known RBP	5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	RTCB	Q9Y3I0	505 aa	Known RBP	5.26	□□□□□ -1.57
SMARCB1-208	ENST00000634926	ADAM11	O75078	769 aa		5.25	□□□□□ -1.57
SMARCB1-208	ENST00000634926	GRIK1	P39086	918 aa		5.25	□□□□□ -1.57
SMARCB1-208	ENST00000634926	ARSD	P51689	593 aa		5.25	□□□□□ -1.57
SMARCB1-208	ENST00000634926	COL13A1	Q5TAT6	717 aa	Predicted RBP	5.25	□□□□□ -1.57
SMARCB1-208	ENST00000634926	POU5F2	Q8N7G0	328 aa		5.25	□□□□□ -1.57
SMARCB1-208	ENST00000634926	CARD10	Q9BWT7	1032 aa		5.25	□□□□□ -1.57
SMARCB1-208	ENST00000634926	EGFR	P00533	1210 aa		5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	EPB42	P16452	691 aa		5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	CDC25B	P30305	580 aa		5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	FAM20C	Q8IXL6	584 aa		5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	UBASH3B	Q8TF42	649 aa		5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	SRA1	Q9HD15	236 aa	Known RBP	5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	PPME1	Q9Y570	386 aa		5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	KCNMB2	Q9Y691	235 aa		5.24	□□□□□ -1.57
SMARCB1-208	ENST00000634926	WDR64	B1ANS9	1081 aa		5.23	□□□□□ -1.57
SMARCB1-208	ENST00000634926	XYLB	O75191	536 aa		5.23	□□□□□ -1.57
SMARCB1-208	ENST00000634926	CD68	P34810	354 aa	Predicted RBP	5.23	□□□□□ -1.57
SMARCB1-208	ENST00000634926	ATP11A	P98196	1134 aa		5.23	□□□□□ -1.57
SMARCB1-208	ENST00000634926	MAP4K3	Q8IVH8	894 aa		5.23	□□□□□ -1.57
SMARCB1-208	ENST00000634926	FAM83C	Q9BQN1	747 aa		5.23	□□□□□ -1.57
SMARCB1-208	ENST00000634926	LRFN2	Q9ULH4	789 aa		5.23	□□□□□ -1.57
SMARCB1-208	ENST00000634926	ATP9B	O43861	1147 aa		5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	HOXD8	P13378	290 aa	Predicted RBP	5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	PREP	P48147	710 aa		5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	MSMP	Q1L6U9	139 aa		5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	CLEC10A	Q8IUN9	316 aa		5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	RGL4	Q8IZJ4	473 aa		5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	C11orf16	Q9NQ32	467 aa		5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	CCDC180	Q9P1Z9	1646 aa		5.22	□□□□□ -1.57
SMARCB1-208	ENST00000634926	GHRH	P01286	108 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	BMP3	P12645	472 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	ITGB5	P18084	799 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	TRIP4	Q15650	581 aa	Predicted RBP	5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	UVSSA	Q2YD98	709 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	BEND4	Q6ZU67	534 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	CMTR1	Q8N1G2	835 aa	Known RBP	5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	MFSD14A	Q96MC6	490 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	CEP41	Q9BYV8	373 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	LACRT	Q9GZZ8	138 aa		5.21	□□□□□ -1.58
SMARCB1-208	ENST00000634926	PSAP	P07602	524 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	IGFBP4	P22692	258 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	SEC13	P55735	322 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	FAM26D	Q5JW98	314 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	HDGFL1	Q5TGJ6	251 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	SPOCD1	Q6ZMY3	1216 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	KLHDC7B	Q96G42	594 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	HINFP	Q9BQA5	517 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	CCDC39	Q9UFE4	941 aa		5.2	□□□□□ -1.58
SMARCB1-208	ENST00000634926	FSCN2	O14926	492 aa		5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	F13B	P05160	661 aa		5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	EPHA1	P21709	976 aa		5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	SOX18	P35713	384 aa		5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	ZNF124	Q15973	351 aa		5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	DUOXA2	Q1HG44	320 aa		5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	CRTC2	Q53ET0	693 aa	Predicted RBP	5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	ZNF648	Q5T619	568 aa	Predicted RBP	5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	SH2B1	Q9NRF2	756 aa	Predicted RBP	5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	PIM2	Q9P1W9	311 aa		5.19	□□□□□ -1.58
SMARCB1-208	ENST00000634926	DPYD	Q12882	1025 aa		5.18	□□□□□ -1.58
SMARCB1-208	ENST00000634926	C11orf91	Q3C1V1	193 aa		5.18	□□□□□ -1.58
SMARCB1-208	ENST00000634926	TREML1	Q86YW5	311 aa		5.18	□□□□□ -1.58
SMARCB1-208	ENST00000634926	KCNF1	Q9H3M0	494 aa		5.18	□□□□□ -1.58
SMARCB1-208	ENST00000634926	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.18	□□□□□ -1.58
SMARCB1-208	ENST00000634926	ARID4A	P29374	1257 aa	Predicted RBP	5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	FBLN7	Q53RD9	439 aa		5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	CEP135	Q66GS9	1140 aa		5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	HGSNAT	Q68CP4	663 aa		5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	FBXL6	Q8N531	539 aa		5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	CCER1	Q8TC90	406 aa	Predicted RBP	5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	MYO19	Q96H55	970 aa		5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	MUC3B	Q9H195	1237 aa		5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	RASSF4	Q9H2L5	321 aa		5.17	□□□□□ -1.58
SMARCB1-208	ENST00000634926	PRNP	P04156	253 aa		5.16	□□□□□ -1.58
SMARCB1-208	ENST00000634926	CDC27	P30260	824 aa		5.16	□□□□□ -1.58
SMARCB1-208	ENST00000634926	WEE1	P30291	646 aa		5.16	□□□□□ -1.58
SMARCB1-208	ENST00000634926	PTK7	Q13308	1070 aa		5.16	□□□□□ -1.58
SMARCB1-208	ENST00000634926	SGO2	Q562F6	1265 aa		5.16	□□□□□ -1.58
SMARCB1-208	ENST00000634926	ASIC4	Q96FT7	647 aa		5.16	□□□□□ -1.58
SMARCB1-208	ENST00000634926	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.16	□□□□□ -1.58
SMARCB1-208	ENST00000634926	PAPLN	O95428	1278 aa		5.15	□□□□□ -1.59
SMARCB1-208	ENST00000634926	FOSL1	P15407	271 aa		5.15	□□□□□ -1.59
SMARCB1-208	ENST00000634926	ETFBKMT	Q8IXQ9	262 aa		5.15	□□□□□ -1.59
SMARCB1-208	ENST00000634926	OR13H1	Q8NG92	308 aa		5.15	□□□□□ -1.59

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