RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
SNRNP48-203ENST00000634363 EYA3Q99504 573 aa20.07■□□□□ 0.8
SNRNP48-203ENST00000634363 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
SNRNP48-203ENST00000634363 LRRC37AA6NMS7 1700 aa20.07■□□□□ 0.8
SNRNP48-203ENST00000634363 HHIPL1Q96JK4 782 aa20.06■□□□□ 0.8
SNRNP48-203ENST00000634363 ZC3H12CQ9C0D7 883 aaKnown RBP20.06■□□□□ 0.8
SNRNP48-203ENST00000634363 PHAXQ9H814 394 aaKnown RBP20.06■□□□□ 0.8
SNRNP48-203ENST00000634363 CASP8AP2Q9UKL3 1982 aa20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 EGFRP00533 1210 aa20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 HUNKP57058 714 aa20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 KRT26Q7Z3Y9 468 aa20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 JARID2Q92833 1246 aaPredicted RBP20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 DCPSQ96C86 337 aaKnown RBP20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 SEC31BQ9NQW1 1179 aa20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 COL4A1P02462 1669 aa20.05■□□□□ 0.8
SNRNP48-203ENST00000634363 TRIM28Q13263 835 aaKnown RBP20.04■□□□□ 0.8
SNRNP48-203ENST00000634363 ZBTB38Q8NAP3 1195 aaPredicted RBP20.04■□□□□ 0.8
SNRNP48-203ENST00000634363 TBC1D16Q8TBP0 767 aa20.04■□□□□ 0.8
SNRNP48-203ENST00000634363 MYD88Q99836 296 aa20.04■□□□□ 0.8
SNRNP48-203ENST00000634363 ANKIB1Q9P2G1 1089 aa20.04■□□□□ 0.8
SNRNP48-203ENST00000634363 CA12O43570 354 aa20.03■□□□□ 0.8
SNRNP48-203ENST00000634363 BRPF1P55201 1214 aaPredicted RBP20.03■□□□□ 0.8
SNRNP48-203ENST00000634363 FAM161AQ3B820 660 aa20.03■□□□□ 0.8
SNRNP48-203ENST00000634363 CCDC85AQ96PX6 553 aaPredicted RBP20.03■□□□□ 0.8
SNRNP48-203ENST00000634363 ZIC5Q96T25 663 aa20.03■□□□□ 0.8
SNRNP48-203ENST00000634363 ADM5C9JUS6 153 aa20.02■□□□□ 0.8
SNRNP48-203ENST00000634363 RPS12P25398 132 aaKnown RBP20.02■□□□□ 0.8
SNRNP48-203ENST00000634363 NOGQ13253 232 aa20.02■□□□□ 0.8
SNRNP48-203ENST00000634363 MIER1Q8N108 512 aa20.02■□□□□ 0.8
SNRNP48-203ENST00000634363 C2orf69Q8N8R5 385 aa20.02■□□□□ 0.8
SNRNP48-203ENST00000634363 RTL9Q8NET4 1388 aa20.01■□□□□ 0.79
SNRNP48-203ENST00000634363 UFL1O94874 794 aa20.01■□□□□ 0.79
SNRNP48-203ENST00000634363 HSP90B1P14625 803 aaKnown RBP20.01■□□□□ 0.79
SNRNP48-203ENST00000634363 CCDC27Q2M243 656 aa20.01■□□□□ 0.79
SNRNP48-203ENST00000634363 GBA2Q9HCG7 927 aaPredicted RBP20.01■□□□□ 0.79
SNRNP48-203ENST00000634363 ZNF853P0CG23 659 aa20■□□□□ 0.79
SNRNP48-203ENST00000634363 KIF4BQ2VIQ3 1234 aa20■□□□□ 0.79
SNRNP48-203ENST00000634363 CCDC152Q4G0S7 254 aa20■□□□□ 0.79
SNRNP48-203ENST00000634363 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
SNRNP48-203ENST00000634363 RGMBQ6NW40 437 aa20■□□□□ 0.79
SNRNP48-203ENST00000634363 GGA1Q9UJY5 639 aa20■□□□□ 0.79
SNRNP48-203ENST00000634363 PDE8AO60658 829 aa19.99■□□□□ 0.79
SNRNP48-203ENST00000634363 VIL1P09327 827 aaKnown RBP19.99■□□□□ 0.79
SNRNP48-203ENST00000634363 GNAI1P63096 354 aa19.99■□□□□ 0.79
SNRNP48-203ENST00000634363 CCDC191Q8NCU4 936 aa19.99■□□□□ 0.79
SNRNP48-203ENST00000634363 MCOLN1Q9GZU1 580 aa19.99■□□□□ 0.79
SNRNP48-203ENST00000634363 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
SNRNP48-203ENST00000634363 SCN9AQ15858 1988 aa19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 ZNF157P51786 506 aaPredicted RBP19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 DGKZQ13574 1117 aa19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 C8orf58Q8NAV2 365 aa19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 PODXL2Q9NZ53 605 aa19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 SALL2Q9Y467 1007 aaPredicted RBP19.98■□□□□ 0.79
SNRNP48-203ENST00000634363 PCCAP05165 728 aaPredicted RBP19.97■□□□□ 0.79
SNRNP48-203ENST00000634363 GGA3Q9NZ52 723 aa19.97■□□□□ 0.79
SNRNP48-203ENST00000634363 ASTN2O75129 1339 aaPredicted RBP19.97■□□□□ 0.79
SNRNP48-203ENST00000634363 DDX58O95786 925 aaKnown RBP19.96■□□□□ 0.79
SNRNP48-203ENST00000634363 MLLT1Q03111 559 aaPredicted RBP19.96■□□□□ 0.79
SNRNP48-203ENST00000634363 ANKRD18AQ8IVF6 992 aa19.96■□□□□ 0.79
SNRNP48-203ENST00000634363 CCDC102AQ96A19 550 aa19.96■□□□□ 0.79
SNRNP48-203ENST00000634363 METTL22Q9BUU2 404 aaPredicted RBP19.96■□□□□ 0.79
SNRNP48-203ENST00000634363 FAM155AB1AL88 458 aaPredicted RBP19.95■□□□□ 0.78
SNRNP48-203ENST00000634363 KIF23Q02241 960 aaPredicted RBP19.95■□□□□ 0.78
SNRNP48-203ENST00000634363 CCDC30Q5VVM6 783 aa19.95■□□□□ 0.78
SNRNP48-203ENST00000634363 MAP3K2Q9Y2U5 619 aa19.95■□□□□ 0.78
SNRNP48-203ENST00000634363 SCARF1Q14162 830 aa19.94■□□□□ 0.78
SNRNP48-203ENST00000634363 ANGEL2Q5VTE6 544 aaKnown RBP19.94■□□□□ 0.78
SNRNP48-203ENST00000634363 RSBN1LQ6PCB5 846 aaPredicted RBP19.94■□□□□ 0.78
SNRNP48-203ENST00000634363 TRPA1O75762 1119 aa19.93■□□□□ 0.78
SNRNP48-203ENST00000634363 CDCA5Q96FF9 252 aa19.93■□□□□ 0.78
SNRNP48-203ENST00000634363 XDHP47989 1333 aa19.93■□□□□ 0.78
SNRNP48-203ENST00000634363 WTIPA6NIX2 430 aaPredicted RBP19.92■□□□□ 0.78
SNRNP48-203ENST00000634363 ATP2B4P23634 1241 aa19.92■□□□□ 0.78
SNRNP48-203ENST00000634363 TSPYL6Q8N831 410 aa19.92■□□□□ 0.78
SNRNP48-203ENST00000634363 AGBL3Q8NEM8 1001 aa19.92■□□□□ 0.78
SNRNP48-203ENST00000634363 IL16Q14005 1332 aa19.92■□□□□ 0.78
SNRNP48-203ENST00000634363 AKAP11Q9UKA4 1901 aa19.92■□□□□ 0.78
SNRNP48-203ENST00000634363 USP17L3A6NCW0 530 aa19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 USP17L4A6NCW7 530 aa19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 USP17L8P0C7I0 530 aa19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 USP17L1Q7RTZ2 530 aa19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 WDR63Q8IWG1 891 aa19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 CDC5LQ99459 802 aaKnown RBP19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 CHMP4AQ9BY43 222 aa19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 SCAF8Q9UPN6 1271 aaKnown RBP19.91■□□□□ 0.78
SNRNP48-203ENST00000634363 PI4KAP2A4QPH2 592 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 RGS19P49795 217 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 CTSWP56202 376 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 ZNF280AP59817 542 aaPredicted RBP19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 KSR2Q6VAB6 950 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 PI4KAP1Q8N8J0 262 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 FBXW7Q969H0 707 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 MYOZ2Q9NPC6 264 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 RNF186Q9NXI6 227 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 SPEF2Q9C093 1822 aa19.9■□□□□ 0.78
SNRNP48-203ENST00000634363 NEXNQ0ZGT2 675 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms