RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ANKRD13DQ6ZTN6 518 aa26.3■■□□□ 1.8
TARDBP-228ENST00000629725 COL4A1P02462 1669 aa26.29■■□□□ 1.8
TARDBP-228ENST00000629725 SULF1Q8IWU6 871 aa26.29■■□□□ 1.8
TARDBP-228ENST00000629725 ISCA1Q9BUE6 129 aa26.29■■□□□ 1.8
TARDBP-228ENST00000629725 SCN9AQ15858 1988 aa26.29■■□□□ 1.8
TARDBP-228ENST00000629725 ATP5J2-PTCD1G3V325 749 aa26.28■■□□□ 1.8
TARDBP-228ENST00000629725 SLC10A3P09131 477 aa26.28■■□□□ 1.8
TARDBP-228ENST00000629725 TBC1D16Q8TBP0 767 aa26.28■■□□□ 1.8
TARDBP-228ENST00000629725 GGA3Q9NZ52 723 aa26.28■■□□□ 1.8
TARDBP-228ENST00000629725 CHL1O00533 1208 aa26.27■■□□□ 1.8
TARDBP-228ENST00000629725 VIL1P09327 827 aaKnown RBP26.27■■□□□ 1.8
TARDBP-228ENST00000629725 RTL5Q5HYW3 569 aaPredicted RBP26.27■■□□□ 1.8
TARDBP-228ENST00000629725 HDGFL1Q5TGJ6 251 aa26.27■■□□□ 1.8
TARDBP-228ENST00000629725 ZC3H12CQ9C0D7 883 aaKnown RBP26.27■■□□□ 1.8
TARDBP-228ENST00000629725 SOX10P56693 466 aa26.26■■□□□ 1.79
TARDBP-228ENST00000629725 RPS8P62241 208 aaKnown RBP26.26■■□□□ 1.79
TARDBP-228ENST00000629725 CSRNP1Q96S65 589 aa26.26■■□□□ 1.79
TARDBP-228ENST00000629725 LAS1LQ9Y4W2 734 aaKnown RBP26.26■■□□□ 1.79
TARDBP-228ENST00000629725 NEUROD2Q15784 382 aa26.25■■□□□ 1.79
TARDBP-228ENST00000629725 DBF4Q9UBU7 674 aaPredicted RBP26.25■■□□□ 1.79
TARDBP-228ENST00000629725 G3V3G9 751 aa26.24■■□□□ 1.79
TARDBP-228ENST00000629725 IRS4O14654 1257 aaPredicted RBP26.24■■□□□ 1.79
TARDBP-228ENST00000629725 DCAF8Q5TAQ9 597 aa26.24■■□□□ 1.79
TARDBP-228ENST00000629725 CDCA5Q96FF9 252 aa26.24■■□□□ 1.79
TARDBP-228ENST00000629725 ASTN2O75129 1339 aaPredicted RBP26.23■■□□□ 1.79
TARDBP-228ENST00000629725 HOXB7P09629 217 aa26.23■■□□□ 1.79
TARDBP-228ENST00000629725 REM2Q8IYK8 340 aaPredicted RBP26.23■■□□□ 1.79
TARDBP-228ENST00000629725 PODXL2Q9NZ53 605 aa26.23■■□□□ 1.79
TARDBP-228ENST00000629725 CTU1Q7Z7A3 348 aaKnown RBP26.22■■□□□ 1.79
TARDBP-228ENST00000629725 ANKIB1Q9P2G1 1089 aa26.22■■□□□ 1.79
TARDBP-228ENST00000629725 TRIM28Q13263 835 aaKnown RBP26.21■■□□□ 1.79
TARDBP-228ENST00000629725 ANGEL2Q5VTE6 544 aaKnown RBP26.21■■□□□ 1.79
TARDBP-228ENST00000629725 HYPKQ9NX55 129 aa26.21■■□□□ 1.79
TARDBP-228ENST00000629725 PSME4Q14997 1843 aa26.21■■□□□ 1.79
TARDBP-228ENST00000629725 UFL1O94874 794 aa26.2■■□□□ 1.78
TARDBP-228ENST00000629725 SCARF1Q14162 830 aa26.2■■□□□ 1.78
TARDBP-228ENST00000629725 RASAL3Q86YV0 1011 aa26.2■■□□□ 1.78
TARDBP-228ENST00000629725 ZNF280AP59817 542 aaPredicted RBP26.19■■□□□ 1.78
TARDBP-228ENST00000629725 RSBN1LQ6PCB5 846 aaPredicted RBP26.19■■□□□ 1.78
TARDBP-228ENST00000629725 CCDC146Q8IYE0 955 aa26.19■■□□□ 1.78
TARDBP-228ENST00000629725 AGBL3Q8NEM8 1001 aa26.19■■□□□ 1.78
TARDBP-228ENST00000629725 SEC31BQ9NQW1 1179 aa26.19■■□□□ 1.78
TARDBP-228ENST00000629725 GGA1Q9UJY5 639 aa26.19■■□□□ 1.78
TARDBP-228ENST00000629725 ZNF609O15014 1411 aa26.18■■□□□ 1.78
TARDBP-228ENST00000629725 HSP90B1P14625 803 aaKnown RBP26.18■■□□□ 1.78
TARDBP-228ENST00000629725 FKBP1BP68106 108 aa26.18■■□□□ 1.78
TARDBP-228ENST00000629725 ZBTB38Q8NAP3 1195 aaPredicted RBP26.18■■□□□ 1.78
TARDBP-228ENST00000629725 TRIM35Q9UPQ4 493 aa26.18■■□□□ 1.78
TARDBP-228ENST00000629725 PAPPA2Q9BXP8 1791 aa26.18■■□□□ 1.78
TARDBP-228ENST00000629725 RALBP1Q15311 655 aa26.16■■□□□ 1.78
TARDBP-228ENST00000629725 RIC3Q7Z5B4 369 aa26.16■■□□□ 1.78
TARDBP-228ENST00000629725 MYOZ2Q9NPC6 264 aa26.15■■□□□ 1.78
TARDBP-228ENST00000629725 PITPNM2Q9BZ72 1349 aa26.14■■□□□ 1.78
TARDBP-228ENST00000629725 USP17L8P0C7I0 530 aa26.14■■□□□ 1.78
TARDBP-228ENST00000629725 CCDC152Q4G0S7 254 aa26.14■■□□□ 1.78
TARDBP-228ENST00000629725 DUSP27Q5VZP5 1158 aa26.14■■□□□ 1.78
TARDBP-228ENST00000629725 GOLGA2Q08379 1002 aa26.13■■□□□ 1.77
TARDBP-228ENST00000629725 RUNDC1Q96C34 613 aa26.13■■□□□ 1.77
TARDBP-228ENST00000629725 HPS5Q9UPZ3 1129 aa26.13■■□□□ 1.77
TARDBP-228ENST00000629725 PKN2Q16513 984 aaKnown RBP26.12■■□□□ 1.77
TARDBP-228ENST00000629725 PRPF38BQ5VTL8 546 aaKnown RBP26.12■■□□□ 1.77
TARDBP-228ENST00000629725 GMLQ99445 158 aa26.12■■□□□ 1.77
TARDBP-228ENST00000629725 HDAC9Q9UKV0 1011 aa26.12■■□□□ 1.77
TARDBP-228ENST00000629725 XDHP47989 1333 aa26.11■■□□□ 1.77
TARDBP-228ENST00000629725 USP17L3A6NCW0 530 aa26.1■■□□□ 1.77
TARDBP-228ENST00000629725 USP17L4A6NCW7 530 aa26.1■■□□□ 1.77
TARDBP-228ENST00000629725 PDE8AO60658 829 aa26.1■■□□□ 1.77
TARDBP-228ENST00000629725 MOB2Q70IA6 237 aa26.1■■□□□ 1.77
TARDBP-228ENST00000629725 USP17L1Q7RTZ2 530 aa26.1■■□□□ 1.77
TARDBP-228ENST00000629725 PODNQ7Z5L7 613 aa26.1■■□□□ 1.77
TARDBP-228ENST00000629725 CCDC85AQ96PX6 553 aaPredicted RBP26.1■■□□□ 1.77
TARDBP-228ENST00000629725 MYD88Q99836 296 aa26.1■■□□□ 1.77
TARDBP-228ENST00000629725 SCAF8Q9UPN6 1271 aaKnown RBP26.1■■□□□ 1.77
TARDBP-228ENST00000629725 TBC1D8O95759 1140 aa26.09■■□□□ 1.77
TARDBP-228ENST00000629725 ANKRD18AQ8IVF6 992 aa26.09■■□□□ 1.77
TARDBP-228ENST00000629725 CCDC191Q8NCU4 936 aa26.09■■□□□ 1.77
TARDBP-228ENST00000629725 ZNF296Q8WUU4 475 aaPredicted RBP26.09■■□□□ 1.77
TARDBP-228ENST00000629725 PHAXQ9H814 394 aaKnown RBP26.09■■□□□ 1.77
TARDBP-228ENST00000629725 UBE2Q2LH0YL09 131 aa26.08■■□□□ 1.77
TARDBP-228ENST00000629725 PCCAP05165 728 aaPredicted RBP26.08■■□□□ 1.77
TARDBP-228ENST00000629725 ATP2B4P23634 1241 aa26.08■■□□□ 1.77
TARDBP-228ENST00000629725 MBIPQ9NS73 344 aa26.08■■□□□ 1.77
TARDBP-228ENST00000629725 TTLL12Q14166 644 aaPredicted RBP26.06■■□□□ 1.76
TARDBP-228ENST00000629725 WDR43Q15061 677 aaKnown RBP eCLIP26.06■■□□□ 1.76
TARDBP-228ENST00000629725 NBPF9Q3BBW0 867 aa26.06■■□□□ 1.76
TARDBP-228ENST00000629725 PRAMEF18Q5VWM3 479 aa26.06■■□□□ 1.76
TARDBP-228ENST00000629725 JARID2Q92833 1246 aaPredicted RBP26.06■■□□□ 1.76
TARDBP-228ENST00000629725 CWC25Q9NXE8 425 aaPredicted RBP26.06■■□□□ 1.76
TARDBP-228ENST00000629725 TM4SF4P48230 202 aa26.05■■□□□ 1.76
TARDBP-228ENST00000629725 OGFOD1Q8N543 542 aa26.04■■□□□ 1.76
TARDBP-228ENST00000629725 MYBBP1AQ9BQG0 1328 aaKnown RBP26.04■■□□□ 1.76
TARDBP-228ENST00000629725 CENPFP49454 3210 aa26.04■■□□□ 1.76
TARDBP-228ENST00000629725 NF2P35240 595 aa26.03■■□□□ 1.76
TARDBP-228ENST00000629725 CDC5LQ99459 802 aaKnown RBP26.03■■□□□ 1.76
TARDBP-228ENST00000629725 MKI67P46013 3256 aaKnown RBP26.03■■□□□ 1.76
TARDBP-228ENST00000629725 SPEF2Q9C093 1822 aa26.02■■□□□ 1.76
TARDBP-228ENST00000629725 GPR25O00155 361 aa26.02■■□□□ 1.76
TARDBP-228ENST00000629725 NOM1Q5C9Z4 860 aaKnown RBP26.02■■□□□ 1.76
TARDBP-228ENST00000629725 MED23Q9ULK4 1368 aa26.02■■□□□ 1.76
TARDBP-228ENST00000629725 ZNF646O15015 1829 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms