RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 GRAPQ13588 217 aa18.42■□□□□ 0.54
CDK7-215ENST00000629350 GRAPLQ8TC17 118 aaPredicted RBP18.42■□□□□ 0.54
CDK7-215ENST00000629350 TAF1DQ9H5J8 278 aaPredicted RBP18.42■□□□□ 0.54
CDK7-215ENST00000629350 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
CDK7-215ENST00000629350 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
CDK7-215ENST00000629350 CCDC30Q5VVM6 783 aa18.41■□□□□ 0.54
CDK7-215ENST00000629350 DPY19L2Q6NUT2 758 aa18.41■□□□□ 0.54
CDK7-215ENST00000629350 GPR101Q96P66 508 aaPredicted RBP18.41■□□□□ 0.54
CDK7-215ENST00000629350 METTL22Q9BUU2 404 aaPredicted RBP18.41■□□□□ 0.54
CDK7-215ENST00000629350 SEC31BQ9NQW1 1179 aa18.41■□□□□ 0.54
CDK7-215ENST00000629350 PI4KAP2A4QPH2 592 aa18.4■□□□□ 0.54
CDK7-215ENST00000629350 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
CDK7-215ENST00000629350 SF3B3Q15393 1217 aaKnown RBP18.4■□□□□ 0.54
CDK7-215ENST00000629350 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
CDK7-215ENST00000629350 CC2D2BQ6DHV5 1058 aa18.4■□□□□ 0.54
CDK7-215ENST00000629350 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
CDK7-215ENST00000629350 LARGE2Q8N3Y3 721 aa18.4■□□□□ 0.54
CDK7-215ENST00000629350 PI4KAP1Q8N8J0 262 aa18.4■□□□□ 0.54
CDK7-215ENST00000629350 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
CDK7-215ENST00000629350 MFRPQ9BY79 579 aa18.4■□□□□ 0.54
CDK7-215ENST00000629350 PPIP5K2O43314 1243 aa18.39■□□□□ 0.53
CDK7-215ENST00000629350 DDX46Q7L014 1031 aaKnown RBP18.39■□□□□ 0.53
CDK7-215ENST00000629350 RTFDC1Q9BY42 306 aaPredicted RBP18.39■□□□□ 0.53
CDK7-215ENST00000629350 ZNF521Q96K83 1311 aa18.39■□□□□ 0.53
CDK7-215ENST00000629350 SCNN1DP51172 638 aa18.38■□□□□ 0.53
CDK7-215ENST00000629350 SP8Q8IXZ3 490 aa18.38■□□□□ 0.53
CDK7-215ENST00000629350 ZBTB38Q8NAP3 1195 aaPredicted RBP18.38■□□□□ 0.53
CDK7-215ENST00000629350 GJA3Q9Y6H8 435 aa18.38■□□□□ 0.53
CDK7-215ENST00000629350 PSME4Q14997 1843 aa18.37■□□□□ 0.53
CDK7-215ENST00000629350 YDJCA8MPS7 323 aa18.37■□□□□ 0.53
CDK7-215ENST00000629350 VAMP4O75379 141 aa18.37■□□□□ 0.53
CDK7-215ENST00000629350 PCCAP05165 728 aaPredicted RBP18.37■□□□□ 0.53
CDK7-215ENST00000629350 GPSM2P81274 684 aa18.37■□□□□ 0.53
CDK7-215ENST00000629350 DPP8Q6V1X1 898 aaPredicted RBP18.37■□□□□ 0.53
CDK7-215ENST00000629350 KSR2Q6VAB6 950 aa18.37■□□□□ 0.53
CDK7-215ENST00000629350 CWC25Q9NXE8 425 aaPredicted RBP18.37■□□□□ 0.53
CDK7-215ENST00000629350 SHTN1A0MZ66 631 aa18.36■□□□□ 0.53
CDK7-215ENST00000629350 GTPBP6O43824 516 aaPredicted RBP18.36■□□□□ 0.53
CDK7-215ENST00000629350 BBOX1O75936 387 aa18.36■□□□□ 0.53
CDK7-215ENST00000629350 WDR63Q8IWG1 891 aa18.36■□□□□ 0.53
CDK7-215ENST00000629350 GPC2Q8N158 579 aa18.36■□□□□ 0.53
CDK7-215ENST00000629350 MPNDQ8N594 471 aa18.36■□□□□ 0.53
CDK7-215ENST00000629350 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
CDK7-215ENST00000629350 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
CDK7-215ENST00000629350 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 EPHX2P34913 555 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 EPS15P42566 896 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 FMR1Q06787 632 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDK7-215ENST00000629350 FLIIQ13045 1269 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 EAPPQ56P03 285 aaPredicted RBP18.35■□□□□ 0.53
CDK7-215ENST00000629350 NIM1KQ8IY84 436 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 JDP2Q8WYK2 163 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 POLLQ9UGP5 575 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 HACL1Q9UJ83 578 aa18.35■□□□□ 0.53
CDK7-215ENST00000629350 PASKQ96RG2 1323 aa18.34■□□□□ 0.53
CDK7-215ENST00000629350 CXCL9Q07325 125 aa18.34■□□□□ 0.53
CDK7-215ENST00000629350 KIAA2012Q0VF49 1180 aa18.34■□□□□ 0.53
CDK7-215ENST00000629350 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
CDK7-215ENST00000629350 CDHR2Q9BYE9 1310 aa18.33■□□□□ 0.53
CDK7-215ENST00000629350 DDX58O95786 925 aaKnown RBP18.33■□□□□ 0.52
CDK7-215ENST00000629350 LDHDQ86WU2 507 aa18.33■□□□□ 0.52
CDK7-215ENST00000629350 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.52
CDK7-215ENST00000629350 KLRG1Q96E93 195 aa18.33■□□□□ 0.52
CDK7-215ENST00000629350 IQCA1LA6NCM1 817 aa18.32■□□□□ 0.52
CDK7-215ENST00000629350 F6X3S4 739 aa18.32■□□□□ 0.52
CDK7-215ENST00000629350 RAD17O75943 681 aa18.32■□□□□ 0.52
CDK7-215ENST00000629350 ITGBL1O95965 494 aaPredicted RBP18.32■□□□□ 0.52
CDK7-215ENST00000629350 CASP7P55210 303 aa18.32■□□□□ 0.52
CDK7-215ENST00000629350 EIF6P56537 245 aaKnown RBP18.32■□□□□ 0.52
CDK7-215ENST00000629350 MAP1SQ66K74 1059 aaPredicted RBP18.32■□□□□ 0.52
CDK7-215ENST00000629350 FBXO22Q8NEZ5 403 aa18.32■□□□□ 0.52
CDK7-215ENST00000629350 KCNQ5Q9NR82 932 aa18.32■□□□□ 0.52
CDK7-215ENST00000629350 TRPM7Q96QT4 1865 aa18.32■□□□□ 0.52
CDK7-215ENST00000629350 RTL9Q8NET4 1388 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 PDE8AO60658 829 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 GMPSP49915 693 aaPredicted RBP18.31■□□□□ 0.52
CDK7-215ENST00000629350 CTSWP56202 376 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 PLCB2Q00722 1185 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 GRIPAP1Q4V328 841 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 GREM2Q9H772 168 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 ZNRF3Q9ULT6 936 aa18.31■□□□□ 0.52
CDK7-215ENST00000629350 RIMBP2O15034 1052 aa18.3■□□□□ 0.52
CDK7-215ENST00000629350 RPS8P62241 208 aaKnown RBP18.3■□□□□ 0.52
CDK7-215ENST00000629350 FKBP5Q13451 457 aaPredicted RBP18.3■□□□□ 0.52
CDK7-215ENST00000629350 DBNDD1Q9H9R9 158 aa18.3■□□□□ 0.52
CDK7-215ENST00000629350 NSFL1CQ9UNZ2 370 aaKnown RBP18.3■□□□□ 0.52
CDK7-215ENST00000629350 GCKRQ14397 625 aa18.29■□□□□ 0.52
CDK7-215ENST00000629350 TTLL11Q8NHH1 800 aa18.29■□□□□ 0.52
CDK7-215ENST00000629350 TBC1D16Q8TBP0 767 aa18.29■□□□□ 0.52
CDK7-215ENST00000629350 MS4A4AQ96JQ5 239 aa18.29■□□□□ 0.52
CDK7-215ENST00000629350 H7C1W4 665 aa18.28■□□□□ 0.52
CDK7-215ENST00000629350 IRX5P78411 483 aaPredicted RBP18.28■□□□□ 0.52
CDK7-215ENST00000629350 DOK7Q18PE1 504 aa18.28■□□□□ 0.52
CDK7-215ENST00000629350 IER5LQ5T953 404 aa18.28■□□□□ 0.52
CDK7-215ENST00000629350 JMYQ8N9B5 988 aa18.28■□□□□ 0.52
CDK7-215ENST00000629350 SUPT20HQ8NEM7 779 aa18.28■□□□□ 0.52
CDK7-215ENST00000629350 TRPM4Q8TD43 1214 aa18.28■□□□□ 0.52
CDK7-215ENST00000629350 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
CDK7-215ENST00000629350 GPRC5DQ9NZD1 345 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 363 ms