RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 RPS12P25398 132 aaKnown RBP22.08■■□□□ 1.13
TCF4-261ENST00000627784 KIF4BQ2VIQ3 1234 aa22.08■■□□□ 1.13
TCF4-261ENST00000627784 PLBD2Q8NHP8 589 aa22.08■■□□□ 1.13
TCF4-261ENST00000627784 PDE4DIPQ5VU43 2346 aa22.08■■□□□ 1.12
TCF4-261ENST00000627784 CHL1O00533 1208 aa22.07■■□□□ 1.12
TCF4-261ENST00000627784 NEUROD2Q15784 382 aa22.07■■□□□ 1.12
TCF4-261ENST00000627784 ANKRD13DQ6ZTN6 518 aa22.07■■□□□ 1.12
TCF4-261ENST00000627784 GGA3Q9NZ52 723 aa22.07■■□□□ 1.12
TCF4-261ENST00000627784 SLC10A3P09131 477 aa22.06■■□□□ 1.12
TCF4-261ENST00000627784 VIL1P09327 827 aaKnown RBP22.06■■□□□ 1.12
TCF4-261ENST00000627784 SCN9AQ15858 1988 aa22.06■■□□□ 1.12
TCF4-261ENST00000627784 RPS8P62241 208 aaKnown RBP22.05■■□□□ 1.12
TCF4-261ENST00000627784 CDCA5Q96FF9 252 aa22.05■■□□□ 1.12
TCF4-261ENST00000627784 SEC31BQ9NQW1 1179 aa22.05■■□□□ 1.12
TCF4-261ENST00000627784 PCDH10Q9P2E7 1040 aa22.05■■□□□ 1.12
TCF4-261ENST00000627784 LAS1LQ9Y4W2 734 aaKnown RBP22.05■■□□□ 1.12
TCF4-261ENST00000627784 IRS4O14654 1257 aaPredicted RBP22.04■■□□□ 1.12
TCF4-261ENST00000627784 SULF1Q8IWU6 871 aa22.04■■□□□ 1.12
TCF4-261ENST00000627784 CCDC146Q8IYE0 955 aa22.04■■□□□ 1.12
TCF4-261ENST00000627784 EYA3Q99504 573 aa22.04■■□□□ 1.12
TCF4-261ENST00000627784 SCAF8Q9UPN6 1271 aaKnown RBP22.04■■□□□ 1.12
TCF4-261ENST00000627784 HDGFL1Q5TGJ6 251 aa22.03■■□□□ 1.12
TCF4-261ENST00000627784 TRIM35Q9UPQ4 493 aa22.03■■□□□ 1.12
TCF4-261ENST00000627784 LMOD3Q0VAK6 560 aa22.02■■□□□ 1.12
TCF4-261ENST00000627784 SCARF1Q14162 830 aa22.02■■□□□ 1.12
TCF4-261ENST00000627784 ANGEL2Q5VTE6 544 aaKnown RBP22.02■■□□□ 1.12
TCF4-261ENST00000627784 RASAL3Q86YV0 1011 aa22.02■■□□□ 1.12
TCF4-261ENST00000627784 ZC3H12CQ9C0D7 883 aaKnown RBP22.02■■□□□ 1.12
TCF4-261ENST00000627784 MOB2Q70IA6 237 aa22.01■■□□□ 1.11
TCF4-261ENST00000627784 PODXL2Q9NZ53 605 aa22.01■■□□□ 1.11
TCF4-261ENST00000627784 UFL1O94874 794 aa22■■□□□ 1.11
TCF4-261ENST00000627784 ZNF280AP59817 542 aaPredicted RBP22■■□□□ 1.11
TCF4-261ENST00000627784 CTU1Q7Z7A3 348 aaKnown RBP22■■□□□ 1.11
TCF4-261ENST00000627784 DBF4Q9UBU7 674 aaPredicted RBP22■■□□□ 1.11
TCF4-261ENST00000627784 TRIM28Q13263 835 aaKnown RBP21.99■■□□□ 1.11
TCF4-261ENST00000627784 JARID2Q92833 1246 aaPredicted RBP21.99■■□□□ 1.11
TCF4-261ENST00000627784 AKAP11Q9UKA4 1901 aa21.99■■□□□ 1.11
TCF4-261ENST00000627784 WTIPA6NIX2 430 aaPredicted RBP21.98■■□□□ 1.11
TCF4-261ENST00000627784 RSBN1LQ6PCB5 846 aaPredicted RBP21.98■■□□□ 1.11
TCF4-261ENST00000627784 ANKIB1Q9P2G1 1089 aa21.98■■□□□ 1.11
TCF4-261ENST00000627784 PRAMEF18Q5VWM3 479 aa21.97■■□□□ 1.11
TCF4-261ENST00000627784 CCDC85AQ96PX6 553 aaPredicted RBP21.97■■□□□ 1.11
TCF4-261ENST00000627784 GMLQ99445 158 aa21.97■■□□□ 1.11
TCF4-261ENST00000627784 GGA1Q9UJY5 639 aa21.97■■□□□ 1.11
TCF4-261ENST00000627784 G3V3G9 751 aa21.96■■□□□ 1.11
TCF4-261ENST00000627784 DCAF8Q5TAQ9 597 aa21.96■■□□□ 1.11
TCF4-261ENST00000627784 DUSP27Q5VZP5 1158 aa21.96■■□□□ 1.11
TCF4-261ENST00000627784 ZBTB38Q8NAP3 1195 aaPredicted RBP21.96■■□□□ 1.11
TCF4-261ENST00000627784 HYPKQ9NX55 129 aa21.96■■□□□ 1.11
TCF4-261ENST00000627784 HPS5Q9UPZ3 1129 aa21.96■■□□□ 1.11
TCF4-261ENST00000627784 TBC1D8O95759 1140 aa21.95■■□□□ 1.1
TCF4-261ENST00000627784 HOXB7P09629 217 aa21.95■■□□□ 1.1
TCF4-261ENST00000627784 AGBL3Q8NEM8 1001 aa21.95■■□□□ 1.1
TCF4-261ENST00000627784 PHAXQ9H814 394 aaKnown RBP21.95■■□□□ 1.1
TCF4-261ENST00000627784 MYOZ2Q9NPC6 264 aa21.95■■□□□ 1.1
TCF4-261ENST00000627784 UBE2Q2LH0YL09 131 aa21.94■■□□□ 1.1
TCF4-261ENST00000627784 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
TCF4-261ENST00000627784 RIC3Q7Z5B4 369 aa21.94■■□□□ 1.1
TCF4-261ENST00000627784 ZNF296Q8WUU4 475 aaPredicted RBP21.93■■□□□ 1.1
TCF4-261ENST00000627784 MXD3Q9BW11 206 aa21.93■■□□□ 1.1
TCF4-261ENST00000627784 MKI67P46013 3256 aaKnown RBP21.93■■□□□ 1.1
TCF4-261ENST00000627784 ZNF609O15014 1411 aa21.92■■□□□ 1.1
TCF4-261ENST00000627784 FKBP1BP68106 108 aa21.92■■□□□ 1.1
TCF4-261ENST00000627784 NBPF9Q3BBW0 867 aa21.92■■□□□ 1.1
TCF4-261ENST00000627784 REM2Q8IYK8 340 aaPredicted RBP21.92■■□□□ 1.1
TCF4-261ENST00000627784 MYD88Q99836 296 aa21.92■■□□□ 1.1
TCF4-261ENST00000627784 PRPF38BQ5VTL8 546 aaKnown RBP21.91■■□□□ 1.1
TCF4-261ENST00000627784 RUNDC1Q96C34 613 aa21.91■■□□□ 1.1
TCF4-261ENST00000627784 MBIPQ9NS73 344 aa21.91■■□□□ 1.1
TCF4-261ENST00000627784 PAPPA2Q9BXP8 1791 aa21.9■■□□□ 1.1
TCF4-261ENST00000627784 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
TCF4-261ENST00000627784 USP17L3A6NCW0 530 aa21.9■■□□□ 1.1
TCF4-261ENST00000627784 USP17L4A6NCW7 530 aa21.9■■□□□ 1.1
TCF4-261ENST00000627784 MKRN3Q13064 507 aaKnown RBP21.9■■□□□ 1.1
TCF4-261ENST00000627784 RALBP1Q15311 655 aa21.9■■□□□ 1.1
TCF4-261ENST00000627784 CCDC152Q4G0S7 254 aa21.9■■□□□ 1.1
TCF4-261ENST00000627784 USP17L1Q7RTZ2 530 aa21.9■■□□□ 1.1
TCF4-261ENST00000627784 ELL2O00472 640 aaPredicted RBP21.89■■□□□ 1.09
TCF4-261ENST00000627784 PDE8AO60658 829 aa21.89■■□□□ 1.09
TCF4-261ENST00000627784 R3HDMLQ9H3Y0 253 aa21.89■■□□□ 1.09
TCF4-261ENST00000627784 HDAC9Q9UKV0 1011 aa21.89■■□□□ 1.09
TCF4-261ENST00000627784 XDHP47989 1333 aa21.88■■□□□ 1.09
TCF4-261ENST00000627784 HTTP42858 3142 aa21.88■■□□□ 1.09
TCF4-261ENST00000627784 PCCAP05165 728 aaPredicted RBP21.88■■□□□ 1.09
TCF4-261ENST00000627784 GOLGA2Q08379 1002 aa21.88■■□□□ 1.09
TCF4-261ENST00000627784 PODNQ7Z5L7 613 aa21.88■■□□□ 1.09
TCF4-261ENST00000627784 CENPFP49454 3210 aa21.87■■□□□ 1.09
TCF4-261ENST00000627784 PSME4Q14997 1843 aa21.87■■□□□ 1.09
TCF4-261ENST00000627784 TM4SF4P48230 202 aa21.87■■□□□ 1.09
TCF4-261ENST00000627784 ANKRD18AQ8IVF6 992 aa21.87■■□□□ 1.09
TCF4-261ENST00000627784 CCDC191Q8NCU4 936 aa21.87■■□□□ 1.09
TCF4-261ENST00000627784 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
TCF4-261ENST00000627784 GPR25O00155 361 aa21.86■■□□□ 1.09
TCF4-261ENST00000627784 ZNF853P0CG23 659 aa21.86■■□□□ 1.09
TCF4-261ENST00000627784 ATP2B4P23634 1241 aa21.86■■□□□ 1.09
TCF4-261ENST00000627784 TTLL12Q14166 644 aaPredicted RBP21.86■■□□□ 1.09
TCF4-261ENST00000627784 PKN2Q16513 984 aaKnown RBP21.86■■□□□ 1.09
TCF4-261ENST00000627784 DACT2Q5SW24 774 aa21.86■■□□□ 1.09
TCF4-261ENST00000627784 WNT10BO00744 389 aa21.85■■□□□ 1.09
TCF4-261ENST00000627784 CWC25Q9NXE8 425 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms