RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SLC4A10Q6U841 1118 aa28.3■■■□□ 2.12
SF1-220ENST00000626028 C9orf78Q9NZ63 289 aaPredicted RBP28.3■■■□□ 2.12
SF1-220ENST00000626028 GGA1Q9UJY5 639 aa28.3■■■□□ 2.12
SF1-220ENST00000626028 GJA3Q9Y6H8 435 aa28.3■■■□□ 2.12
SF1-220ENST00000626028 IGHMBP2P38935 993 aaKnown RBP28.29■■■□□ 2.12
SF1-220ENST00000626028 ZC3H12CQ9C0D7 883 aaKnown RBP28.29■■■□□ 2.12
SF1-220ENST00000626028 ITGA6P23229 1130 aa28.28■■■□□ 2.12
SF1-220ENST00000626028 CIAPIN1Q6FI81 312 aa28.28■■■□□ 2.12
SF1-220ENST00000626028 UTYO14607 1347 aa28.27■■■□□ 2.12
SF1-220ENST00000626028 ATP2B4P23634 1241 aa28.27■■■□□ 2.12
SF1-220ENST00000626028 SCNN1DP51172 638 aa28.27■■■□□ 2.12
SF1-220ENST00000626028 FOXO4P98177 505 aa28.27■■■□□ 2.12
SF1-220ENST00000626028 SMC4Q9NTJ3 1288 aa28.27■■■□□ 2.12
SF1-220ENST00000626028 MINPP1Q9UNW1 487 aa28.27■■■□□ 2.12
SF1-220ENST00000626028 UFL1O94874 794 aa28.26■■■□□ 2.11
SF1-220ENST00000626028 A0A1B0GUL6 1792 aa28.25■■■□□ 2.11
SF1-220ENST00000626028 SCN9AQ15858 1988 aa28.25■■■□□ 2.11
SF1-220ENST00000626028 ANKRD18BA2A2Z9 1011 aa28.25■■■□□ 2.11
SF1-220ENST00000626028 FAM161AQ3B820 660 aa28.25■■■□□ 2.11
SF1-220ENST00000626028 GPRC5DQ9NZD1 345 aa28.25■■■□□ 2.11
SF1-220ENST00000626028 YDJCA8MPS7 323 aa28.24■■■□□ 2.11
SF1-220ENST00000626028 IFIT5Q13325 482 aaKnown RBP28.24■■■□□ 2.11
SF1-220ENST00000626028 MPHOSPH8Q99549 860 aa28.24■■■□□ 2.11
SF1-220ENST00000626028 USP50Q70EL3 339 aaPredicted RBP28.23■■■□□ 2.11
SF1-220ENST00000626028 ANKRD2Q9GZV1 360 aa28.23■■■□□ 2.11
SF1-220ENST00000626028 RIMBP2O15034 1052 aa28.22■■■□□ 2.11
SF1-220ENST00000626028 BCL2L13Q9BXK5 485 aa28.22■■■□□ 2.11
SF1-220ENST00000626028 LEMD3Q9Y2U8 911 aa28.22■■■□□ 2.11
SF1-220ENST00000626028 ECE2O60344 883 aa28.21■■■□□ 2.11
SF1-220ENST00000626028 RAD17O75943 681 aa28.21■■■□□ 2.11
SF1-220ENST00000626028 EAPPQ56P03 285 aaPredicted RBP28.21■■■□□ 2.11
SF1-220ENST00000626028 MED23Q9ULK4 1368 aa28.21■■■□□ 2.11
SF1-220ENST00000626028 G3V3G9 751 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 POTEIP0CG38 1075 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 POTEJP0CG39 1038 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 RPS12P25398 132 aaKnown RBP28.2■■■□□ 2.1
SF1-220ENST00000626028 CCDC57Q2TAC2 916 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 DCAF8Q5TAQ9 597 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 LMBR1LQ6UX01 489 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 DPF2Q92785 391 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 DBNDD1Q9H9R9 158 aa28.2■■■□□ 2.1
SF1-220ENST00000626028 ADARB2Q9NS39 739 aaKnown RBP28.2■■■□□ 2.1
SF1-220ENST00000626028 ZNF609O15014 1411 aa28.19■■■□□ 2.1
SF1-220ENST00000626028 EPS15P42566 896 aa28.19■■■□□ 2.1
SF1-220ENST00000626028 CCT4P50991 539 aaKnown RBP28.19■■■□□ 2.1
SF1-220ENST00000626028 HNRNPUQ00839 825 aaKnown RBP eCLIP28.19■■■□□ 2.1
SF1-220ENST00000626028 KIF16BQ96L93 1317 aa28.18■■■□□ 2.1
SF1-220ENST00000626028 GMPSP49915 693 aaPredicted RBP28.18■■■□□ 2.1
SF1-220ENST00000626028 RARSP54136 660 aaKnown RBP28.18■■■□□ 2.1
SF1-220ENST00000626028 PODNQ7Z5L7 613 aa28.18■■■□□ 2.1
SF1-220ENST00000626028 ARHGAP45Q92619 1136 aa28.18■■■□□ 2.1
SF1-220ENST00000626028 NBPF7P0C2Y1 421 aaPredicted RBP28.17■■■□□ 2.1
SF1-220ENST00000626028 API5Q9BZZ5 524 aaKnown RBP28.17■■■□□ 2.1
SF1-220ENST00000626028 CLEC11AQ9Y240 323 aa28.17■■■□□ 2.1
SF1-220ENST00000626028 TRPM7Q96QT4 1865 aa28.17■■■□□ 2.1
SF1-220ENST00000626028 DOK7Q18PE1 504 aa28.16■■■□□ 2.1
SF1-220ENST00000626028 EPHA10Q5JZY3 1008 aa28.16■■■□□ 2.1
SF1-220ENST00000626028 CHMP3Q9Y3E7 222 aa28.16■■■□□ 2.1
SF1-220ENST00000626028 PASKQ96RG2 1323 aa28.16■■■□□ 2.1
SF1-220ENST00000626028 PSMD14O00487 310 aa28.15■■■□□ 2.1
SF1-220ENST00000626028 RABL6Q3YEC7 729 aaPredicted RBP28.15■■■□□ 2.1
SF1-220ENST00000626028 DNAJC5GQ8N7S2 189 aa28.15■■■□□ 2.1
SF1-220ENST00000626028 H7C1D1 291 aa28.14■■■□□ 2.1
SF1-220ENST00000626028 ITGBL1O95965 494 aaPredicted RBP28.14■■■□□ 2.1
SF1-220ENST00000626028 VIL1P09327 827 aaKnown RBP28.14■■■□□ 2.1
SF1-220ENST00000626028 KAZALD1Q96I82 304 aa28.14■■■□□ 2.1
SF1-220ENST00000626028 SUCLG2Q96I99 432 aa28.14■■■□□ 2.1
SF1-220ENST00000626028 GPR101Q96P66 508 aaPredicted RBP28.14■■■□□ 2.1
SF1-220ENST00000626028 USP44Q9H0E7 712 aa28.14■■■□□ 2.1
SF1-220ENST00000626028 NOB1Q9ULX3 412 aaKnown RBP28.14■■■□□ 2.1
SF1-220ENST00000626028 ZNF804BA4D1E1 1349 aa28.14■■■□□ 2.09
SF1-220ENST00000626028 CHRNDQ07001 517 aa28.13■■■□□ 2.09
SF1-220ENST00000626028 TAF7LQ5H9L4 462 aa28.13■■■□□ 2.09
SF1-220ENST00000626028 ZC3H15Q8WU90 426 aaKnown RBP28.13■■■□□ 2.09
SF1-220ENST00000626028 COA1Q9GZY4 146 aa28.13■■■□□ 2.09
SF1-220ENST00000626028 CNOT7Q9UIV1 285 aaKnown RBP28.13■■■□□ 2.09
SF1-220ENST00000626028 HDAC5Q9UQL6 1122 aa28.13■■■□□ 2.09
SF1-220ENST00000626028 ZBED9Q6R2W3 1325 aa28.13■■■□□ 2.09
SF1-220ENST00000626028 ZNF646O15015 1829 aaPredicted RBP28.13■■■□□ 2.09
SF1-220ENST00000626028 LDHAL6AQ6ZMR3 332 aa28.12■■■□□ 2.09
SF1-220ENST00000626028 CNTROBQ8N137 903 aa28.12■■■□□ 2.09
SF1-220ENST00000626028 CREBZFQ9NS37 354 aa28.12■■■□□ 2.09
SF1-220ENST00000626028 IPO8O15397 1037 aaKnown RBP28.11■■■□□ 2.09
SF1-220ENST00000626028 C15orf52Q6ZUT6 534 aaKnown RBP28.11■■■□□ 2.09
SF1-220ENST00000626028 PGAP2Q9UHJ9 254 aa28.11■■■□□ 2.09
SF1-220ENST00000626028 AGBL3Q8NEM8 1001 aa28.1■■■□□ 2.09
SF1-220ENST00000626028 BICC1Q9H694 974 aaKnown RBP28.1■■■□□ 2.09
SF1-220ENST00000626028 POLR2AP24928 1970 aaKnown RBP28.1■■■□□ 2.09
SF1-220ENST00000626028 KCNJ4P48050 445 aa28.09■■■□□ 2.09
SF1-220ENST00000626028 MICALL2Q8IY33 904 aa28.09■■■□□ 2.09
SF1-220ENST00000626028 USP17L3A6NCW0 530 aa28.08■■■□□ 2.09
SF1-220ENST00000626028 USP17L4A6NCW7 530 aa28.08■■■□□ 2.09
SF1-220ENST00000626028 MAP1SQ66K74 1059 aaPredicted RBP28.08■■■□□ 2.09
SF1-220ENST00000626028 USP17L1Q7RTZ2 530 aa28.08■■■□□ 2.09
SF1-220ENST00000626028 KLRG1Q96E93 195 aa28.08■■■□□ 2.09
SF1-220ENST00000626028 KCNQ5Q9NR82 932 aa28.08■■■□□ 2.09
SF1-220ENST00000626028 CNNM1Q9NRU3 951 aa28.08■■■□□ 2.09
SF1-220ENST00000626028 ZBTB12Q9Y330 459 aaPredicted RBP28.08■■■□□ 2.09
SF1-220ENST00000626028 MMP14P50281 582 aa28.07■■■□□ 2.08
SF1-220ENST00000626028 RSBN1LQ6PCB5 846 aaPredicted RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms