RNA–Protein interactions for RNA: ENST00000624930.1

SMG6-IT1-201, SMG6 intronic transcript 1, humanhuman

BASIC

Gene SMG6-IT1, Length 374 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-IT1-201ENST00000624930 PALD1Q9ULE6 856 aa11.85□□□□□ -0.51
SMG6-IT1-201ENST00000624930 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
SMG6-IT1-201ENST00000624930 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
SMG6-IT1-201ENST00000624930 BCORQ6W2J9 1755 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 A0A0G2JS52 829 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 TAF5LO75529 589 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 UQCRFS1P1P0C7P4 283 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 ZKSCAN1P17029 563 aaPredicted RBP11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 LPIN2Q92539 896 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 CNNM1Q9NRU3 951 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 RIC1Q4ADV7 1423 aa11.84□□□□□ -0.51
SMG6-IT1-201ENST00000624930 LY75O60449 1722 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 A0A0D9SFI3 127 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PSMA5P28066 241 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ARID4AP29374 1257 aaPredicted RBP11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 NUCB2P80303 420 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PTH1RQ03431 593 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 KRT32Q14532 448 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 RAB3GAP1Q15042 981 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TTF1Q15361 905 aaPredicted RBP11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PUM3Q15397 648 aaKnown RBP11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 FAM227BQ96M60 508 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TTC14Q96N46 770 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 DSCC1Q9BVC3 393 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
SMG6-IT1-201ENST00000624930 AK9Q5TCS8 1911 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 BTAF1O14981 1849 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 IGSF3O75054 1194 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ZPR1O75312 459 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PTMSP20962 102 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TTC39AQ5SRH9 613 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 GORABQ5T7V8 394 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 VPS53Q5VIR6 699 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ZNF772Q68DY9 489 aaPredicted RBP11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ZSCAN25Q6NSZ9 544 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ZSCAN31Q96LW9 406 aaPredicted RBP11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 RBM8AQ9Y5S9 174 aaKnown RBP11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 LAMB2P55268 1798 aa11.82□□□□□ -0.52
SMG6-IT1-201ENST00000624930 SCN7AQ01118 1682 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PDIA4P13667 645 aaKnown RBP11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 CREB3L3Q68CJ9 461 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TPTE2Q6XPS3 522 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 KRT27Q7Z3Y8 459 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 SETDB2Q96T68 719 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 DNAJC2Q99543 621 aaKnown RBP11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 MPHOSPH8Q99549 860 aa11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 BSDC1Q9NW68 430 aaPredicted RBP11.81□□□□□ -0.52
SMG6-IT1-201ENST00000624930 RPAP1Q9BWH6 1393 aaPredicted RBP11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 MYH3P11055 1940 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 GOLIM4O00461 696 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 SLC27A2O14975 620 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 GNPATO15228 680 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 SLC5A1P13866 664 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 RBM6P78332 1123 aaKnown RBP11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TMED8Q6PL24 325 aaPredicted RBP11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 RUFY3Q7L099 469 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 LIMCH1Q9UPQ0 1083 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 CYP46A1Q9Y6A2 500 aa11.8□□□□□ -0.52
SMG6-IT1-201ENST00000624930 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ADORA1P30542 326 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 NBR1Q14596 966 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ANKRD1Q15327 319 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 UBE3CQ15386 1083 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ERFEQ4G0M1 354 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PRPF40BQ6NWY9 871 aaKnown RBP11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 EDC3Q96F86 508 aaKnown RBP11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 SH2B1Q9NRF2 756 aaPredicted RBP11.79□□□□□ -0.52
SMG6-IT1-201ENST00000624930 DDX60Q8IY21 1712 aaKnown RBP11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 PLSCR1O15162 318 aa11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 FRAT2O75474 233 aaPredicted RBP11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 MCM4P33991 863 aa11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 CCDC102BQ68D86 513 aa11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ZNF589Q86UQ0 364 aaPredicted RBP11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 APPBP2Q92624 585 aa11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 GBP4Q96PP9 640 aa11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 CCDC85AQ96PX6 553 aaPredicted RBP11.78□□□□□ -0.52
SMG6-IT1-201ENST00000624930 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms