RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 ME1P48163 572 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 HMGN5P82970 282 aaKnown RBP11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 TTLL7Q6ZT98 887 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 LPIN2Q92539 896 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 HOOK2Q96ED9 719 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 CEP131Q9UPN4 1083 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 ZBTB1Q9Y2K1 713 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 FIBPO43427 364 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 MBD3O95983 291 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 CERS3Q8IU89 383 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 PIGBQ92521 554 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 DDX11Q96FC9 970 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 E9PCH4 1651 aa11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 PPRC1Q5VV67 1664 aaKnown RBP11.93□□□□□ -0.5
SRGAP2-217ENST00000624873 NEURL1BA8MQ27 555 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 RNF113AO15541 343 aaKnown RBP11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 MCM5P33992 734 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 IL27Q8NEV9 243 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 TBC1D22AQ8WUA7 517 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 SLC4A8Q2Y0W8 1093 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 NEK1Q96PY6 1258 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 CDK12Q9NYV4 1490 aaPredicted RBP11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 PCCAP05165 728 aaPredicted RBP11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 CCDC82Q8N4S0 544 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 KDM4FA0A1W2PPD8 638 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 MAGEB6Q8N7X4 407 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
SRGAP2-217ENST00000624873 TIMM10P62072 90 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 SSRP1Q08945 709 aaKnown RBP11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 H7C1D1 291 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 ZBTB7BO15156 539 aaPredicted RBP11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 IGHDP01880 384 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 GNAQP50148 359 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 CCDC194A0A1B0GVG4 234 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 RLBP1P12271 317 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 CTSWP56202 376 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 WTAPQ15007 396 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 VPS72Q15906 364 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 RAB34Q9BZG1 259 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 OVOS2A0A0G2JMS6 1433 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 OVOS2A0A0J9YW53 1432 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 OVOS2Q6IE36 1432 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 SERPINB2P05120 415 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 C8orf76Q96K31 380 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 LIMCH1Q9UPQ0 1083 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 JAG2Q9Y219 1238 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
SRGAP2-217ENST00000624873 TEX11Q8IYF3 940 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 USP31Q70CQ4 1352 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 NBPF7P0C2Y1 421 aaPredicted RBP11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 SDSP20132 328 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 ATP2B4P23634 1241 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 NLRP5P59047 1200 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 STIM1Q13586 685 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 TMC4Q7Z404 712 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 VAT1LQ9HCJ6 419 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 IARSP41252 1262 aaKnown RBP11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 CCDC83Q8IWF9 413 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
SRGAP2-217ENST00000624873 ADAMTS13Q76LX8 1427 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 MIGA1Q8NAN2 632 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 XAGE2Q96GT9 111 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 TNNQ9UQP3 1299 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 CRB1P82279 1406 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 LAMC1P11047 1609 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 CYP27B1O15528 508 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 TAF5LO75529 589 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 OFD1O75665 1012 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 NCOA3Q9Y6Q9 1424 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 SH2D4AQ9H788 454 aa11.89□□□□□ -0.51
SRGAP2-217ENST00000624873 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 MICU3Q86XE3 530 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 KDRP35968 1356 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 PIK3C2BO00750 1634 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 B4DLN1 442 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 MRPL12P52815 198 aaKnown RBP11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 DLGAP5Q15398 846 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 SLC27A3Q5K4L6 730 aa11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 MAGEC2Q9UBF1 373 aaPredicted RBP11.88□□□□□ -0.51
SRGAP2-217ENST00000624873 SETBP1Q9Y6X0 1596 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms