RNA–Protein interactions for RNA: ENST00000624534.1

SMIM11B-206, Transcript of small integral membrane protein 11B, humanhuman

TSL 4

Gene SMIM11B, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-206ENST00000624534 XDHP47989 1333 aa19.31■□□□□ 0.68
SMIM11B-206ENST00000624534 LMNB1P20700 586 aa19.31■□□□□ 0.68
SMIM11B-206ENST00000624534 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
SMIM11B-206ENST00000624534 CNNM1Q9NRU3 951 aa19.31■□□□□ 0.68
SMIM11B-206ENST00000624534 MINPP1Q9UNW1 487 aa19.31■□□□□ 0.68
SMIM11B-206ENST00000624534 NSFL1CQ9UNZ2 370 aaKnown RBP19.31■□□□□ 0.68
SMIM11B-206ENST00000624534 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
SMIM11B-206ENST00000624534 SRGAP3O43295 1099 aa19.3■□□□□ 0.68
SMIM11B-206ENST00000624534 RASSF7Q02833 373 aa19.3■□□□□ 0.68
SMIM11B-206ENST00000624534 ZBTB40Q9NUA8 1239 aa19.3■□□□□ 0.68
SMIM11B-206ENST00000624534 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
SMIM11B-206ENST00000624534 DUOX1Q9NRD9 1551 aa19.29■□□□□ 0.68
SMIM11B-206ENST00000624534 RFX5P48382 616 aaPredicted RBP19.29■□□□□ 0.68
SMIM11B-206ENST00000624534 ATP8B2P98198 1209 aa19.29■□□□□ 0.68
SMIM11B-206ENST00000624534 ZNF594Q96JF6 807 aaPredicted RBP19.29■□□□□ 0.68
SMIM11B-206ENST00000624534 UTRNP46939 3433 aa19.29■□□□□ 0.68
SMIM11B-206ENST00000624534 MROH5Q6ZUA9 1318 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 ATP2B4P23634 1241 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 GPSM2P81274 684 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 PTPN12Q05209 780 aaKnown RBP19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 EYA3Q99504 573 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 COPRSQ9NQ92 184 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 GGA1Q9UJY5 639 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
SMIM11B-206ENST00000624534 ZC3H4Q9UPT8 1303 aaKnown RBP19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 CIAO1O76071 339 aa19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 CHRNDQ07001 517 aa19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 AAMPQ13685 434 aa19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 RPAP2Q8IXW5 612 aaPredicted RBP19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 RNF181Q9P0P0 153 aa19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 LEMD3Q9Y2U8 911 aa19.27■□□□□ 0.68
SMIM11B-206ENST00000624534 C6orf229H3BNL8 230 aa19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 EYA2O00167 538 aa19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 C9orf131Q5VYM1 1079 aa19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 CEP85Q6P2H3 762 aa19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 TBC1D16Q8TBP0 767 aa19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 SSH3Q8TE77 659 aa19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 RIPOR2Q9Y4F9 1068 aa19.26■□□□□ 0.67
SMIM11B-206ENST00000624534 UFL1O94874 794 aa19.25■□□□□ 0.67
SMIM11B-206ENST00000624534 POLA2Q14181 598 aa19.25■□□□□ 0.67
SMIM11B-206ENST00000624534 SLC51AQ86UW1 340 aa19.25■□□□□ 0.67
SMIM11B-206ENST00000624534 PNMA6EA0A0J9YXQ4 647 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 HMMRO75330 724 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 KCNJ4P48050 445 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 KIAA2012Q0VF49 1180 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 WASHC4Q2M389 1173 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 LARGE2Q8N3Y3 721 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 KLHDC4Q8TBB5 520 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 JDP2Q8WYK2 163 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 CRBNQ96SW2 442 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 PUS3Q9BZE2 481 aaKnown RBP19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 POLLQ9UGP5 575 aa19.24■□□□□ 0.67
SMIM11B-206ENST00000624534 LRRC24Q50LG9 513 aa19.23■□□□□ 0.67
SMIM11B-206ENST00000624534 METTL24Q5JXM2 366 aa19.23■□□□□ 0.67
SMIM11B-206ENST00000624534 ZC3H12CQ9C0D7 883 aaKnown RBP19.23■□□□□ 0.67
SMIM11B-206ENST00000624534 ZNF804BA4D1E1 1349 aa19.23■□□□□ 0.67
SMIM11B-206ENST00000624534 MED23Q9ULK4 1368 aa19.22■□□□□ 0.67
SMIM11B-206ENST00000624534 PRELPP51888 382 aa19.22■□□□□ 0.67
SMIM11B-206ENST00000624534 PDE8BO95263 885 aa19.21■□□□□ 0.67
SMIM11B-206ENST00000624534 G3BP1Q13283 466 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMIM11B-206ENST00000624534 UBE4AQ14139 1066 aa19.21■□□□□ 0.67
SMIM11B-206ENST00000624534 AOC3Q16853 763 aa19.21■□□□□ 0.67
SMIM11B-206ENST00000624534 NIM1KQ8IY84 436 aa19.21■□□□□ 0.67
SMIM11B-206ENST00000624534 SIL1Q9H173 461 aa19.21■□□□□ 0.67
SMIM11B-206ENST00000624534 PA2G4Q9UQ80 394 aaKnown RBP19.21■□□□□ 0.67
SMIM11B-206ENST00000624534 TAF5LO75529 589 aa19.2■□□□□ 0.66
SMIM11B-206ENST00000624534 C15orf52Q6ZUT6 534 aaKnown RBP19.2■□□□□ 0.66
SMIM11B-206ENST00000624534 ATG9AQ7Z3C6 839 aa19.2■□□□□ 0.66
SMIM11B-206ENST00000624534 HELBQ8NG08 1087 aaPredicted RBP19.2■□□□□ 0.66
SMIM11B-206ENST00000624534 CEP126Q9P2H0 1117 aa19.2■□□□□ 0.66
SMIM11B-206ENST00000624534 G3V3G9 751 aa19.19■□□□□ 0.66
SMIM11B-206ENST00000624534 HSP90AB4PQ58FF6 505 aa19.19■□□□□ 0.66
SMIM11B-206ENST00000624534 DCAF8Q5TAQ9 597 aa19.19■□□□□ 0.66
SMIM11B-206ENST00000624534 VGLL2Q8N8G2 317 aa19.19■□□□□ 0.66
SMIM11B-206ENST00000624534 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
SMIM11B-206ENST00000624534 PSME4Q14997 1843 aa19.18■□□□□ 0.66
SMIM11B-206ENST00000624534 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
SMIM11B-206ENST00000624534 PUM3Q15397 648 aaKnown RBP19.18■□□□□ 0.66
SMIM11B-206ENST00000624534 ZNRF3Q9ULT6 936 aa19.18■□□□□ 0.66
SMIM11B-206ENST00000624534 FZD9O00144 591 aa19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 RIMBP2O15034 1052 aa19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 YY1P25490 414 aa19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 EIF6P56537 245 aaKnown RBP19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 OS9Q13438 667 aaPredicted RBP19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 DPY19L2Q6NUT2 758 aa19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 ERC1Q8IUD2 1116 aa19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 COL4A5P29400 1685 aa19.17■□□□□ 0.66
SMIM11B-206ENST00000624534 IFIT1P09914 478 aaKnown RBP19.16■□□□□ 0.66
SMIM11B-206ENST00000624534 GPR101Q96P66 508 aaPredicted RBP19.16■□□□□ 0.66
SMIM11B-206ENST00000624534 COA1Q9GZY4 146 aa19.16■□□□□ 0.66
SMIM11B-206ENST00000624534 AKAP2Q9Y2D5 859 aa19.16■□□□□ 0.66
SMIM11B-206ENST00000624534 ARAP2Q8WZ64 1704 aa19.16■□□□□ 0.66
SMIM11B-206ENST00000624534 SLC5A1P13866 664 aa19.15■□□□□ 0.66
SMIM11B-206ENST00000624534 ZNF804AQ7Z570 1209 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms