RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 ITGA6P23229 1130 aa15.56■□□□□ 0.08
CBWD3-218ENST00000622755 ATP2B4P23634 1241 aa15.56■□□□□ 0.08
CBWD3-218ENST00000622755 EPHX2P34913 555 aa15.56■□□□□ 0.08
CBWD3-218ENST00000622755 IFIT5Q13325 482 aaKnown RBP15.56■□□□□ 0.08
CBWD3-218ENST00000622755 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
CBWD3-218ENST00000622755 CCDC57Q2TAC2 916 aa15.56■□□□□ 0.08
CBWD3-218ENST00000622755 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
CBWD3-218ENST00000622755 SSH1Q8WYL5 1049 aa15.56■□□□□ 0.08
CBWD3-218ENST00000622755 BSDC1Q9NW68 430 aaPredicted RBP15.56■□□□□ 0.08
CBWD3-218ENST00000622755 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
CBWD3-218ENST00000622755 SPEF2Q9C093 1822 aa15.55■□□□□ 0.08
CBWD3-218ENST00000622755 CHADLQ6NUI6 762 aa15.55■□□□□ 0.08
CBWD3-218ENST00000622755 TRMT2AQ8IZ69 625 aaKnown RBP15.55■□□□□ 0.08
CBWD3-218ENST00000622755 TBC1D16Q8TBP0 767 aa15.55■□□□□ 0.08
CBWD3-218ENST00000622755 ANKRD2Q9GZV1 360 aa15.55■□□□□ 0.08
CBWD3-218ENST00000622755 TAF1DQ9H5J8 278 aaPredicted RBP15.55■□□□□ 0.08
CBWD3-218ENST00000622755 HDAC5Q9UQL6 1122 aa15.55■□□□□ 0.08
CBWD3-218ENST00000622755 KCNJ4P48050 445 aa15.54■□□□□ 0.08
CBWD3-218ENST00000622755 KIF16BQ96L93 1317 aa15.54■□□□□ 0.08
CBWD3-218ENST00000622755 POTECB2RU33 542 aa15.53■□□□□ 0.08
CBWD3-218ENST00000622755 CSF1RP07333 972 aa15.53■□□□□ 0.08
CBWD3-218ENST00000622755 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
CBWD3-218ENST00000622755 API5Q9BZZ5 524 aaKnown RBP15.53■□□□□ 0.08
CBWD3-218ENST00000622755 POLLQ9UGP5 575 aa15.53■□□□□ 0.08
CBWD3-218ENST00000622755 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.08
CBWD3-218ENST00000622755 ECE2O60344 883 aa15.52■□□□□ 0.08
CBWD3-218ENST00000622755 RAD17O75943 681 aa15.52■□□□□ 0.08
CBWD3-218ENST00000622755 CCT4P50991 539 aaKnown RBP15.52■□□□□ 0.08
CBWD3-218ENST00000622755 CASP7P55210 303 aa15.52■□□□□ 0.08
CBWD3-218ENST00000622755 CXCL9Q07325 125 aa15.52■□□□□ 0.08
CBWD3-218ENST00000622755 DBNDD1Q9H9R9 158 aa15.52■□□□□ 0.08
CBWD3-218ENST00000622755 DUOX1Q9NRD9 1551 aa15.52■□□□□ 0.08
CBWD3-218ENST00000622755 H7C1D1 291 aa15.51■□□□□ 0.07
CBWD3-218ENST00000622755 LMBR1LQ6UX01 489 aa15.51■□□□□ 0.07
CBWD3-218ENST00000622755 USP50Q70EL3 339 aaPredicted RBP15.51■□□□□ 0.07
CBWD3-218ENST00000622755 SLC51AQ86UW1 340 aa15.51■□□□□ 0.07
CBWD3-218ENST00000622755 ADARB2Q9NS39 739 aaKnown RBP15.51■□□□□ 0.07
CBWD3-218ENST00000622755 LEMD3Q9Y2U8 911 aa15.51■□□□□ 0.07
CBWD3-218ENST00000622755 COL4A5P29400 1685 aa15.51■□□□□ 0.07
CBWD3-218ENST00000622755 CNNM1Q9NRU3 951 aa15.51■□□□□ 0.07
CBWD3-218ENST00000622755 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
CBWD3-218ENST00000622755 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
CBWD3-218ENST00000622755 DOK7Q18PE1 504 aa15.5■□□□□ 0.07
CBWD3-218ENST00000622755 GPRC5DQ9NZD1 345 aa15.5■□□□□ 0.07
CBWD3-218ENST00000622755 LTBP1Q14766 1721 aa15.49■□□□□ 0.07
CBWD3-218ENST00000622755 MED23Q9ULK4 1368 aa15.49■□□□□ 0.07
CBWD3-218ENST00000622755 GMPSP49915 693 aaPredicted RBP15.49■□□□□ 0.07
CBWD3-218ENST00000622755 SCNN1DP51172 638 aa15.49■□□□□ 0.07
CBWD3-218ENST00000622755 BRPF1P55201 1214 aaPredicted RBP15.49■□□□□ 0.07
CBWD3-218ENST00000622755 FOXO4P98177 505 aa15.49■□□□□ 0.07
CBWD3-218ENST00000622755 LDHAL6AQ6ZMR3 332 aa15.49■□□□□ 0.07
CBWD3-218ENST00000622755 PODNQ7Z5L7 613 aa15.49■□□□□ 0.07
CBWD3-218ENST00000622755 NOB1Q9ULX3 412 aaKnown RBP15.49■□□□□ 0.07
CBWD3-218ENST00000622755 ZNF804BA4D1E1 1349 aa15.48■□□□□ 0.07
CBWD3-218ENST00000622755 RARSP54136 660 aaKnown RBP15.48■□□□□ 0.07
CBWD3-218ENST00000622755 UTYO14607 1347 aa15.47■□□□□ 0.07
CBWD3-218ENST00000622755 ZBED9Q6R2W3 1325 aa15.47■□□□□ 0.07
CBWD3-218ENST00000622755 NBPF7P0C2Y1 421 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-218ENST00000622755 UBTFL1P0CB47 393 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-218ENST00000622755 EPS15P42566 896 aa15.47■□□□□ 0.07
CBWD3-218ENST00000622755 CHRNDQ07001 517 aa15.47■□□□□ 0.07
CBWD3-218ENST00000622755 ARHGAP45Q92619 1136 aa15.47■□□□□ 0.07
CBWD3-218ENST00000622755 DPF2Q92785 391 aa15.47■□□□□ 0.07
CBWD3-218ENST00000622755 GPR101Q96P66 508 aaPredicted RBP15.47■□□□□ 0.07
CBWD3-218ENST00000622755 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
CBWD3-218ENST00000622755 COL4A1P02462 1669 aa15.47■□□□□ 0.07
CBWD3-218ENST00000622755 YDJCA8MPS7 323 aa15.46■□□□□ 0.07
CBWD3-218ENST00000622755 PSMD14O00487 310 aa15.46■□□□□ 0.07
CBWD3-218ENST00000622755 FBXW7Q969H0 707 aa15.46■□□□□ 0.07
CBWD3-218ENST00000622755 SUCLG2Q96I99 432 aa15.46■□□□□ 0.07
CBWD3-218ENST00000622755 COA1Q9GZY4 146 aa15.46■□□□□ 0.07
CBWD3-218ENST00000622755 MICALL2Q8IY33 904 aa15.45■□□□□ 0.06
CBWD3-218ENST00000622755 CNTROBQ8N137 903 aa15.45■□□□□ 0.06
CBWD3-218ENST00000622755 FRAT1Q92837 279 aaPredicted RBP15.45■□□□□ 0.06
CBWD3-218ENST00000622755 MYO3BQ8WXR4 1341 aa15.45■□□□□ 0.06
CBWD3-218ENST00000622755 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 PLIN1O60240 522 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 ZNF804AQ7Z570 1209 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 AGBL3Q8NEM8 1001 aa15.44■□□□□ 0.06
CBWD3-218ENST00000622755 BICC1Q9H694 974 aaKnown RBP15.44■□□□□ 0.06
CBWD3-218ENST00000622755 EPHA10Q5JZY3 1008 aa15.43■□□□□ 0.06
CBWD3-218ENST00000622755 MAP1SQ66K74 1059 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-218ENST00000622755 OGFOD1Q8N543 542 aa15.43■□□□□ 0.06
CBWD3-218ENST00000622755 ZC3H15Q8WU90 426 aaKnown RBP15.43■□□□□ 0.06
CBWD3-218ENST00000622755 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
CBWD3-218ENST00000622755 ZBTB12Q9Y330 459 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-218ENST00000622755 MROH5Q6ZUA9 1318 aa15.43■□□□□ 0.06
CBWD3-218ENST00000622755 GNAI3P08754 354 aa15.43■□□□□ 0.06
CBWD3-218ENST00000622755 VIL1P09327 827 aaKnown RBP15.43■□□□□ 0.06
CBWD3-218ENST00000622755 RABL6Q3YEC7 729 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-218ENST00000622755 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
CBWD3-218ENST00000622755 USP44Q9H0E7 712 aa15.43■□□□□ 0.06
CBWD3-218ENST00000622755 ADAMTSL1Q8N6G6 1762 aa15.42■□□□□ 0.06
CBWD3-218ENST00000622755 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
CBWD3-218ENST00000622755 MMP14P50281 582 aa15.42■□□□□ 0.06
CBWD3-218ENST00000622755 ZKSCAN2Q63HK3 967 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms