RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 SEPT6Q14141 434 aa13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 TBC1D31Q96DN5 1066 aa13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 IQSEC3Q9UPP2 1182 aaPredicted RBP13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 NOP56O00567 594 aaKnown RBP13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 WDR46O15213 610 aaKnown RBP13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 CYP7A1P22680 504 aa13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 TSTA3Q13630 321 aaPredicted RBP13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 IFIT1BQ5T764 474 aaKnown RBP13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 NCAPGQ9BPX3 1015 aa13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 VIMP08670 466 aaKnown RBP13.78□□□□□ -0.2
SLC6A6-210ENST00000622186 KIF2AO00139 706 aaPredicted RBP13.77□□□□□ -0.2
SLC6A6-210ENST00000622186 BIN1O00499 593 aa13.77□□□□□ -0.2
SLC6A6-210ENST00000622186 TAF7Q15545 349 aaPredicted RBP13.77□□□□□ -0.2
SLC6A6-210ENST00000622186 NUDT16Q96DE0 195 aaKnown RBP13.77□□□□□ -0.2
SLC6A6-210ENST00000622186 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.2
SLC6A6-210ENST00000622186 NSRP1Q9H0G5 558 aaKnown RBP13.77□□□□□ -0.2
SLC6A6-210ENST00000622186 STAT6P42226 847 aa13.77□□□□□ -0.2
SLC6A6-210ENST00000622186 HAUS2Q9NVX0 235 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 HSF2BPO75031 334 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 MX1P20591 662 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 MICAL1Q8TDZ2 1067 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 GANCQ8TET4 914 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 SPC25Q9HBM1 224 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 RMND1Q9NWS8 449 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 HYPKQ9NX55 129 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 PPP2R1AP30153 589 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 PPP2R5DQ14738 602 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 RRAGBQ5VZM2 374 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 TNPO1Q92973 898 aaKnown RBP13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 ANKRD30BQ9BXX2 1392 aa13.77□□□□□ -0.21
SLC6A6-210ENST00000622186 ATP5J2-PTCD1G3V325 749 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 ERCC5P28715 1186 aaPredicted RBP13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 FSIP1Q8NA03 581 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 SPATA17Q96L03 361 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 ZYXQ15942 572 aaKnown RBP13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 JAG2Q9Y219 1238 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 UQCRFS1P1P0C7P4 283 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 CCT6AP40227 531 aaKnown RBP13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 FAM204AQ9H8W3 233 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 DPY19L2Q6NUT2 758 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 KIF9Q9HAQ2 790 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 IFRD2Q12894 506 aaPredicted RBP13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 BIRC3Q13489 604 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
SLC6A6-210ENST00000622186 ESYT2A0FGR8 921 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 WTAPQ15007 396 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 ISM2Q6H9L7 571 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 FNBP4Q8N3X1 1017 aaPredicted RBP13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 SLC4A4Q9Y6R1 1079 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 ALDH3A1P30838 453 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 CCDC129Q6ZRS4 1044 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 CCDC125Q86Z20 511 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 TRIM7Q9C029 511 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 AGTPBP1Q9UPW5 1226 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 KRT5P13647 590 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 NYXQ9GZU5 481 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 MKRN3Q13064 507 aaKnown RBP13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 ACBD5Q5T8D3 534 aaPredicted RBP13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 GABPB2Q8TAK5 448 aaPredicted RBP13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 FNBP1Q96RU3 617 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 SH2D4AQ9H788 454 aa13.75□□□□□ -0.21
SLC6A6-210ENST00000622186 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 GOLGA6CA6NDK9 693 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 GOLGA6BA6NDN3 693 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 STX10O60499 249 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 GOLGA6DP0CG33 693 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 FBXW4P57775 412 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 INF2Q27J81 1249 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 GOLGA6AQ9NYA3 693 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 NAA16Q6N069 864 aaPredicted RBP13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 NCOA7Q8NI08 942 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 RTCBQ9Y3I0 505 aaKnown RBP13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 HS1BP3Q53T59 392 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 MSL1Q68DK7 614 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 VPS52Q8N1B4 723 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 POTEB2H3BUK9 544 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 N4BP3O15049 544 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 POLR3GO15318 223 aaPredicted RBP13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 NR1I2O75469 434 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 KRT9P35527 623 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 UAP1Q16222 522 aaPredicted RBP13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 WDR44Q5JSH3 913 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 SLC52A1Q9NWF4 448 aa13.74□□□□□ -0.21
SLC6A6-210ENST00000622186 OPA1O60313 960 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms